Pairwise Alignments

Query, 309 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

Subject, 312 a.a., PCP degradation transcriptional activation protein from Azospirillum sp. SherDot2

 Score =  184 bits (468), Expect = 2e-51
 Identities = 109/303 (35%), Positives = 169/303 (55%), Gaps = 7/303 (2%)

Query: 1   MNLNKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGM 60
           M+L+ +DLNL + FDA+  E ++TRAG  +G TQPA+S ALARLR    D LFVR   G+
Sbjct: 1   MDLHGIDLNLLVAFDALMAERSVTRAGARIGRTQPAMSAALARLRGLLKDELFVRGPNGL 60

Query: 61  VPTPMAQNIIGPVRNALSLLRVSVQESRIFNPLQANKNYRISMTDLTEAVILPALFQRLR 120
            PTP+A ++  P+  AL+ L+ ++  ++ F+P  +  ++ + ++D     +LPAL + LR
Sbjct: 61  QPTPLALDLAQPIGRALTELQQALAFTQSFDPSTSTASFTLGLSDHPTFALLPALLEILR 120

Query: 121 RLAPAVT--IESFLSKRRETTKELAAGRLDFAVDAPLNTDPQVRHVKLMEDRYVCGMRKG 178
             AP VT  I +F++ R +    L AG +D  V  P  T  ++    L E+R+VC +R+G
Sbjct: 121 EQAPGVTLRIRNFIA-RDDAIGMLDAGEVDLTVGVPPTTTGRILSRILFEERFVCVVRRG 179

Query: 179 HPLANKATLTLDDYLSQSHIHISSRRSGLGHVDLALGKMGIQRRIALRSQHYMMATQVLQ 238
           HP   +  L L  +L QSH+ +S      G VD AL + G++RR+AL       A  ++ 
Sbjct: 180 HPTV-RPPLELSGFLEQSHLLVSPENESYGVVDAALARQGLKRRLALTLPQLYAAPALVA 238

Query: 239 QTDMVMTVPERF--ARRNDLHYVYLPVS-DVPSVETHLYWHESTDQDPANRWMREQIIEL 295
           QTD++ T+ E    A  +      +P   D+P +   L WH   D  PA RW R+ +  +
Sbjct: 239 QTDLIATLMEGVVAASGHAERLCIMPAPLDLPPILFALSWHRRNDVHPAQRWFRDLLASV 298

Query: 296 SQR 298
             R
Sbjct: 299 PHR 301