Pairwise Alignments

Query, 294 a.a., murein-DD-endopeptidase, Serine peptidase, MEROPS family S11 from Pseudomonas syringae pv. syringae B728a

Subject, 297 a.a., D-alanyl-D-alanine endopeptidase from Escherichia coli ECOR38

 Score =  377 bits (969), Expect = e-109
 Identities = 182/276 (65%), Positives = 232/276 (84%)

Query: 19  SNLHLASGSAMVIDLQTDKVLYSSNPDVIVPIASVTKLMTAMVVLDAKQPMDEVIPVNIS 78
           S   +ASGSAM++DL T+KV+YS++PD++ PIAS++KLMTAMVVLDA+ P+DE + V+IS
Sbjct: 21  SQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDIS 80

Query: 79  QTPEMKGVFSRVKLGSEMNRRDMLLITLMSSENRAAASLAHSYPGGYPAFILAMNAKAKA 138
           QTPEMKGV+SRV+L SE++R+DMLL+ LMSSENRAAASLAH YPGGY AFI AMNAKAK+
Sbjct: 81  QTPEMKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKS 140

Query: 139 LGMKHTAYVEPTGLSVYNVSTARDLTKLVMAARKYPLLSELSTTEQKTVTFRKPTYTLGF 198
           LGM +T +VEPTGLSV+NVSTARDLTKL++A+++YPL+ +LSTT +   TF  PTYTL F
Sbjct: 141 LGMNNTRFVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPF 200

Query: 199 SNTDHLVRKDNWDIKLTKTGFTNQAGHCLVLLTSMANRPVSVVILDAFGKYTHFADASRI 258
            NT+HLV +DNW+I+LTKTGFTN AGHCLV+ T + N+PV++V++DAFGKYTHFADASR+
Sbjct: 201 RNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRL 260

Query: 259 RKWMETGQSGPAPEVALQYKKEKNLVMRQTGIQARD 294
           R W+ETG+  P P  AL YKK+K   M   G  A++
Sbjct: 261 RTWIETGKVMPVPAAALSYKKQKAAQMAAAGQTAQN 296