Pairwise Alignments

Query, 290 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

Subject, 317 a.a., putrescine ABC transporter permease PotH from Escherichia coli ECRC98

 Score =  149 bits (375), Expect = 1e-40
 Identities = 73/251 (29%), Positives = 149/251 (59%), Gaps = 6/251 (2%)

Query: 42  VFDYQVGVKSDSYTLANYVAVVTDSYFYEIFLRTFWISALVTLLCVLIGVPEAYILSRMG 101
           + ++  G  S +    N++ +  D  +++ +L++  ++A+ T  C+LIG P A+ ++   
Sbjct: 69  LMEWADGQLSITLNFGNFLQLTGDPLYFDAYLQSLQVAAISTFCCLLIGYPLAWAVAHSK 128

Query: 102 TPWRSIFLILILTPLLISVVVRAFGWSLLLGADGLINQVIQFMG--GRPVKLLYTPFAVV 159
              R+I L+L++ P   S ++R + W  +L  +G++N  + ++G   +P+ +L+T  AV 
Sbjct: 129 PSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLLWLGVIDQPLTILHTNLAVY 188

Query: 160 IALVHVMLPFMIIPVWTSLQKLDPTAEQAALSLGASQAKVMRLIVLPQVMPGVLSGSLIV 219
           I +V+  +PFM++P++T+L ++D +  +AAL LGA   K    +++P    G+++GS++V
Sbjct: 189 IGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSMLV 248

Query: 220 FGLAASSFAIPGLLGGRRLKMVATVIYDQYLSELNWPMGATLAVALLLVNLLVMLSWNRM 279
           F  A   F IP LLGG    M+  V++ ++ +  +WP+ + +A+ +LL+ L+V + W   
Sbjct: 249 FIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLL-LIVPIMW--- 304

Query: 280 IEGRYKKTLGE 290
                +K++GE
Sbjct: 305 FHKHQQKSVGE 315