Pairwise Alignments

Query, 913 a.a., YD repeat protein from Pseudomonas syringae pv. syringae B728a

Subject, 1409 a.a., YD repeat protein from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  157 bits (396), Expect = 6e-42
 Identities = 205/815 (25%), Positives = 323/815 (39%), Gaps = 168/815 (20%)

Query: 32   TALGQVASIDGARTDVNDVTQYAYDAQGNLTTVTNALGQVYALASFDSYGNPQSITDPNG 91
            T + QV   DG+    N      YDA+GNL    +ALG      + +  G P +I DP  
Sbjct: 573  TLITQVDYPDGSTWKAN------YDAKGNLVAEIDALGHKTEYLNGED-GLPHTIVDP-- 623

Query: 92   VMTTLSYTPQGW--LASLT----IDSSTTQYAYNEVGDLLQVTTA-----------DGNW 134
               TL      W  LA +         +T Y Y+E   L+ VT A           DG  
Sbjct: 624  ---TLKSKYLWWNNLAQVQRFQDCSGKSTYYRYDERHHLVAVTDALNNTTTLERKPDGEV 680

Query: 135  VKYSYDDARRLIGVRNRLGESINYTLDPMGNRTA---------ERTKDANGAVVHLQRRV 185
            ++ ++ D        N LG+ + +T D  G  T          +  +DA G  +  +   
Sbjct: 681  LRINHPDGTHETFTYNELGQVLTHT-DGKGQTTQLLRNGRGLPKWRQDAKGQTITYE--- 736

Query: 186  FDELGRLIRVVGAGDQTQRYGYDLNDNQSSDTTPRNNKTQQAFDALNRVSKIVDPLQGVT 245
            +D+  RL+ +    D T R+ YD  D    +    N   + +++    ++++ +      
Sbjct: 737  YDKAIRLVALTNENDATYRFAYDNADRLIEEKRIDNLTRRFSYNLGGHLTQVEE------ 790

Query: 246  ALGYNSDDKVTKVVDPRGVTTLYTYDSLGNRISSKSPDGGTSTYAYDEANNLI----RST 301
             +GY       K   PR  T L   D +G R+ +K  D     YAYD+ + L+    + T
Sbjct: 791  -IGYGD-----KGEQPRRSTHLER-DPIG-RLLAKLNDDARQDYAYDDGDRLLSIERKPT 842

Query: 302  DAR---GVVTE---YAYDALNRLTSKSYPATPALNIKFLYDQTADGNLGIGHLTGLQDSA 355
            D     G+  E   +AYD L RL  ++ P                               
Sbjct: 843  DTGRKLGITAEKIDFAYDLLGRLVKETTPQ------------------------------ 872

Query: 356  GVLTYTYDAKGNLVRQHRSVGVNSGDYYETLNYGYDAARNLVQIGYPSNINLTFTRNSAA 415
            G L Y YD   NL     ++ + +G +   L YG          G+   +NL     S  
Sbjct: 873  GALAYEYDPLSNLT----TLTLPTGQHLNHLYYGS---------GHLHQMNLDGQLISDM 919

Query: 416  QVTGVKLAIGNKTATLASNISYQPFG----------PVNSLTWGNGILLS--RTYDQDYQ 463
            +   +   I      L S   Y   G          P   L+     L+   R  +  Y 
Sbjct: 920  ERDDLHREIYRTQGKLTSCFGYDSMGRKAWQYATTLPAEKLSQIQNPLIKPERYVEHAYN 979

Query: 464  LTQQQVGNWQTTYRYDADSNISETATSLWGAVQYEYDALGRLTQEQTNSVK--KAYSFDA 521
               ++       Y YD    +S T   L G  QYEY+A G+L    T  V   + + +DA
Sbjct: 980  PIHRR-------YEYDPAGELSRTLDKLRGETQYEYEANGQLLARNTGRVVDGEEFRYDA 1032

Query: 522  TGNRTQRTTTNLTTSDATETQSLTYASDSNRVTSINGSTLPVDAAGNHTQ-----INGRR 576
              NR      N  TS     +        NR+          DA GN  +     +  + 
Sbjct: 1033 AANRL-----NFNTSRFDHVKD-------NRLRQWANHEYKYDAWGNLIEKVVGIVRWQT 1080

Query: 577  FTYDSQGRLSE---VYQANIYKIADYKYNALGQRIIKRAYVMGSQALAGTTTYLYDPSGK 633
            FTYD + RL +   +    +   + Y+Y++LG+R+ K++ + G         +L+     
Sbjct: 1081 FTYDCENRLVKTETMADTQVESTSSYQYDSLGRRVAKQSEIKGHTE---HKRFLWQGL-- 1135

Query: 634  LIGQTLYDGNGQKTSGQYWFWLDNMPLAQLTANFSTLGEVSSSKLIYLHVDHLNTPRLAT 693
               + L + N  ++S   +      PLA++       GEV + K+ Y H D + TP   T
Sbjct: 1136 ---RMLREENPGQSSLYIYEPGSYAPLARVDEKE---GEVEN-KVYYFHTDQIGTPLEMT 1188

Query: 694  DSSQALLWRWNSDAYGVGSPEEDVDGDGKATTIALRFPGQIYDAQTQLSYNYYRDYNPDT 753
            D+   ++W+    A+G  + E+ V  + +     LRF GQ +D +T L YN +R Y+P+ 
Sbjct: 1189 DAEGQIVWQAKYRAWG--AVEKLVVNEVEQN---LRFQGQYFDVETGLHYNTFRYYDPEI 1243

Query: 754  GRYVQSDPIGLGGGLNTYAYVNANPMSFIDPMGLA 788
            GR++  DPIGL GG N Y Y   + + +IDP GLA
Sbjct: 1244 GRFITQDPIGLLGGYNLYQYA-PSAIGWIDPQGLA 1277