Pairwise Alignments
Query, 913 a.a., YD repeat protein from Pseudomonas syringae pv. syringae B728a
Subject, 685 a.a., RHS domain-containing protein from Erwinia amylovora T8
Score = 155 bits (392), Expect = 8e-42
Identities = 157/582 (26%), Positives = 241/582 (41%), Gaps = 88/582 (15%)
Query: 266 TLYTYDSLGNRISSKSPDGGTSTYAYDEANNLIRSTDARGVVTEYAYDALNRLTS----- 320
T Y YD G + +G + YD L+ TD G + Y YD L +LT+
Sbjct: 4 TRYRYDRFGRMTGLINANGERWQFEYDNGVRLLAQTDYAGRRSRYRYDVLGQLTAVTRQP 63
Query: 321 --KSYPATPALNIKFLYD--------QTADGNLGIG--------HLTGLQ-----DSAG- 356
P P YD QTA+ H L SAG
Sbjct: 64 LANDTPPLPEQTTLMEYDALGRISAKQTAEQRTAYAYQPHGITLHRVALARWRQAQSAGR 123
Query: 357 ------VLTYTYDAKGNLVRQHRSVGVNSGDYYETLNYGYDAARNLVQIGYPSNINLTFT 410
LT+++DA GNL+ + N G ++ + YDA NL Q P L F
Sbjct: 124 AAEWDETLTFSHDALGNLLSEE-----NHGGRWQ---HQYDALGNLQQSTTPDGAALRFM 175
Query: 411 RNSAAQVTGVKLAIGNKTATLASNISYQPFGPVNSLTWGNGIL-LSRTYDQDYQLTQQQV 469
R + + V L + LA Y+ +T G L L YD+ ++ ++
Sbjct: 176 RYGSGHLLQVDLQQAGRRVELAG---YRRDALHREVTRSQGPLSLETRYDRAGRIVMRRS 232
Query: 470 GNWQTTYRYDADSNISETATSLWGAVQ----------YEYDALGRLTQEQTNSVKKAYSF 519
+ Y++D +++ G + + YDALG++T + + +
Sbjct: 233 ALLERRYQWDGLDRVTQQMLIQGGGAKADEAEFAQQRFGYDALGQVTSRLRPQHAERFHY 292
Query: 520 DATGNRTQRTTTNLTTSDATETQSLTYASDSNRVTSINGSTLPVDAAGNHTQINGRRFTY 579
DA GNRT + + Q + D G A + T+ +RF Y
Sbjct: 293 DAAGNRTAHPGQTVWHNLLLRLQGARWEYDGF------GRLAWRRAGRDGTE---QRFVY 343
Query: 580 DSQGRLSEVYQANI--YKIADYKYNALGQRIIKRAYVMGSQALAGTTTYLYDPSG-KLIG 636
D + R+SEV Y A Y+Y+ LG+R K Y G +A +D SG +++G
Sbjct: 344 DDEHRVSEVTLTGHREYSRAVYRYDLLGRRTQKILYRHG-EAEENAEVIHFDWSGLRMVG 402
Query: 637 QTLYDGNGQKTSGQY----WFWLDNMPLAQLTANFSTLGEVSSSKLIYLHVDHLNTPRLA 692
+ ++T Y W PLA++ ++GE ++ + H + P
Sbjct: 403 ERSSRTPQRRTRYIYGEGGW-----EPLARV----DSVGEDDPGEVFWYHTELNGLPERM 453
Query: 693 TDSSQALLWRWNSDAYGVGSPEEDVDGDGKATTIALRFPGQIYDAQTQLSYNYYRDYNPD 752
TD +W+ A+G E + + + LRF GQ +DA+T L YN +R Y+P
Sbjct: 454 TDEYGERVWQGRFSAWG----EAEHESSPRGLRQNLRFQGQYFDAETGLHYNLFRYYDPA 509
Query: 753 TGRYVQSDPIGLGGGLNTYAYVNANPMSFIDPMGLAATALPT 794
GR+ Q+DPIGL GG+NTYAYV +P+++IDP+GL PT
Sbjct: 510 GGRFTQTDPIGLAGGVNTYAYV-PDPLNWIDPLGLKGRCAPT 550
Score = 37.0 bits (84), Expect = 4e-06
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 13/199 (6%)
Query: 26 TISRTYTALGQVASIDGARTDVNDVTQYAYDAQGNLTTVTNALGQVYALASFDSYGNPQS 85
T+ R A + A G + ++ +++DA GNL + N G+ +D+ GN Q
Sbjct: 106 TLHRVALARWRQAQSAGRAAEWDETLTFSHDALGNLLSEENHGGRWQ--HQYDALGNLQQ 163
Query: 86 ITDPNGVMTTLSYTPQGWLASLTIDSSTTQY---AYNEVGDLLQVTTADGNW-VKYSYDD 141
T P+G G L + + + + Y +VT + G ++ YD
Sbjct: 164 STTPDGAALRFMRYGSGHLLQVDLQQAGRRVELAGYRRDALHREVTRSQGPLSLETRYDR 223
Query: 142 ARRLIGVRNRLGESINYTLDPMGNRTAERTKDANGAVVH-----LQRRVFDELGRLIRVV 196
A R++ R+ L E Y D + T + GA QR +D LG++ +
Sbjct: 224 AGRIVMRRSALLER-RYQWDGLDRVTQQMLIQGGGAKADEAEFAQQRFGYDALGQVTSRL 282
Query: 197 GAGDQTQRYGYDLNDNQSS 215
+R+ YD N+++
Sbjct: 283 -RPQHAERFHYDAAGNRTA 300
Score = 35.0 bits (79), Expect = 2e-05
Identities = 71/295 (24%), Positives = 111/295 (37%), Gaps = 35/295 (11%)
Query: 51 TQYAYDAQGNLTTVTNALGQVYALASFDSYGNPQSITDPNGVMTTLSYTPQGWLASLTID 110
T+Y YD G +T + NA G+ + +D+ + TD G + Y G L ++
Sbjct: 4 TRYRYDRFGRMTGLINANGERWQF-EYDNGVRLLAQTDYAGRRSRYRYDVLGQLTAV--- 59
Query: 111 SSTTQYAYNEVGDLLQVTTADGNWVKYSYDDARRLIGVRNRLGESINYTLDPMG---NRT 167
T Q N+ L + TT ++Y DA I + + Y P G +R
Sbjct: 60 --TRQPLANDTPPLPEQTTL----MEY---DALGRISAKQTAEQRTAYAYQPHGITLHRV 110
Query: 168 A----ERTKDANGAVVHLQRRVF--DELGRLIRVVGAGDQTQRYGYDLNDNQSSDTTPRN 221
A + + A A + F D LG L+ G + Q + YD N TTP
Sbjct: 111 ALARWRQAQSAGRAAEWDETLTFSHDALGNLLSEENHGGRWQ-HQYDALGNLQQSTTPDG 169
Query: 222 NKTQQAFDALNRVSKIVDPLQG--VTALGYNSDDKVTKVVDPRGVTTLYTYDSLGNRISS 279
+ + ++ G V GY D +V +G +L T RI
Sbjct: 170 AALRFMRYGSGHLLQVDLQQAGRRVELAGYRRDALHREVTRSQGPLSLETRYDRAGRIVM 229
Query: 280 KSPDGGTSTYAYDEANN-----LIRSTDARGVVTEYA-----YDALNRLTSKSYP 324
+ Y +D + LI+ A+ E+A YDAL ++TS+ P
Sbjct: 230 RRSALLERRYQWDGLDRVTQQMLIQGGGAKADEAEFAQQRFGYDALGQVTSRLRP 284
Score = 30.8 bits (68), Expect = 3e-04
Identities = 77/326 (23%), Positives = 124/326 (38%), Gaps = 64/326 (19%)
Query: 31 YTALGQVASIDGARTDVNDVTQYAYDAQGNLTTVTNALGQVYALASFDSYGNPQSITDPN 90
Y ALG+++ A+ T YAY G L +V ALA + + + +
Sbjct: 80 YDALGRIS----AKQTAEQRTAYAYQPHGI------TLHRV-ALARWRQAQSAGRAAEWD 128
Query: 91 GVMTTLSYTPQGWLASLTIDSSTTQYAYNEVGDLLQVTTADGNWVKYSYDDARRLIGV-- 148
+T S+ G L S Q+ Y+ +G+L Q TT DG +++ + L+ V
Sbjct: 129 ETLT-FSHDALGNLLSEENHGGRWQHQYDALGNLQQSTTPDGAALRFMRYGSGHLLQVDL 187
Query: 149 --RNRLGESINYTLDPM--------GNRTAERTKDANGAVVH-----LQRRV----FDEL 189
R E Y D + G + E D G +V L+RR D +
Sbjct: 188 QQAGRRVELAGYRRDALHREVTRSQGPLSLETRYDRAGRIVMRRSALLERRYQWDGLDRV 247
Query: 190 GRLIRVVGAGDQT-------QRYGYDLNDNQSSDTTPRNNKTQQAFDALNRVSKIVDPLQ 242
+ + + G G + QR+GYD +S P++ + A NR + P Q
Sbjct: 248 TQQMLIQGGGAKADEAEFAQQRFGYDALGQVTSRLRPQHAERFHYDAAGNRTA---HPGQ 304
Query: 243 GVTALGYNSDDKVTKVVDPRGVTTLYTYDSLGNRISSKS-PDGGTSTYAYDEANNLIRST 301
V + + ++ R + YD G ++ DG + YD+ + + T
Sbjct: 305 TVW------HNLLLRLQGAR-----WEYDGFGRLAWRRAGRDGTEQRFVYDDEHRVSEVT 353
Query: 302 ------DARGVVTEYAYDALNRLTSK 321
+R V Y YD L R T K
Sbjct: 354 LTGHREYSRAV---YRYDLLGRRTQK 376