Pairwise Alignments

Query, 386 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a

Subject, 399 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Ralstonia solanacearum UW163

 Score =  313 bits (803), Expect = 4e-90
 Identities = 177/382 (46%), Positives = 240/382 (62%), Gaps = 9/382 (2%)

Query: 12  AVALLAALGLSGCEQKQQQDHA-ASTAPKEVEAITVNTESFTVVDELPGRIEPVRVAQVR 70
           A A    + L+ C  KQ Q    A   P EV  +TV   +  +  ELPGR+E  RVAQVR
Sbjct: 11  AAAAFTVVALAACGNKQAQGPGGAGMPPTEVGVVTVQPHAVGLTTELPGRLEATRVAQVR 70

Query: 71  ARVAGIVLSRNFEEGADVKAGAVLFQIDPAPFKAALSKAQGDLARTQATLFETQATVKRY 130
           ARVAGIVL R ++EG+DVKAG VLF+IDPA ++A+L  A+  LAR +AT  + Q   +RY
Sbjct: 71  ARVAGIVLKRTYQEGSDVKAGDVLFRIDPAQYQASLDSAKAQLARAEATQTQAQLKAERY 130

Query: 131 ESLVEIEAVSRQTFDTARSALQNAVAAKRSAEADVETARLNLGYATVKAPISGRIGRAMV 190
           + LV   A+S+Q +D A +A + A A   +A A  ETA+LNLGYATV +PISGR G A V
Sbjct: 131 KPLVATNAISKQDYDDAVAAAKQATADVGAARAATETAKLNLGYATVTSPISGRAGLAQV 190

Query: 191 TEGALVGQG-ETTLLATIQQLDPVYADFTQPAAEALQMRAAIQEGRLPKGGEDALSLSV- 248
           TEGALVGQG + TLLAT+QQ+DP+Y  FTQ + E ++++ A++ G+L    + A  +++ 
Sbjct: 191 TEGALVGQGSDATLLATVQQIDPIYLTFTQSSTEVMRLQEALKAGKLAAASDTAAKVTLV 250

Query: 249 --DGTDYTSTGTLLFTDVAVDRTTGQVSLRARFANPKGVLLPGMYVRVRTPQRVDSNAIL 306
             DG  Y  TG L F+D+ VD+TTG ++LRA F N +  LLPGMYVR R  Q VD  AI 
Sbjct: 251 TEDGRVYAQTGKLYFSDLTVDQTTGSITLRAIFPNAERTLLPGMYVRARLEQAVDQQAIT 310

Query: 307 VPQRAVQRSGDGAARVLVIAQDGTVEARPVKTGAMQDSRWQITEGLKAGEQVIVGNMTGL 366
           VPQ+AV R  DG+  V+ +  +G V  R V+      + W ++ GL+AG++VIV  +  +
Sbjct: 311 VPQQAVSRGADGST-VMTVNAEGKVAPRKVQADRAVGTEWIVSSGLQAGDKVIVDGLQKV 369

Query: 367 SAG---DKVARKSPSAQPQAKA 385
             G     VA  +  AQ Q  A
Sbjct: 370 QPGAPVKPVAWHAGGAQGQGAA 391