Pairwise Alignments

Query, 386 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a

Subject, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Pseudomonas fluorescens SBW25

 Score =  305 bits (781), Expect = 1e-87
 Identities = 172/369 (46%), Positives = 233/369 (63%), Gaps = 13/369 (3%)

Query: 11  PAVALLAALGLSGCEQKQQQDHAASTAPK----EVEAITVNTESFTVVDELPGRIEPVRV 66
           P   L   L LS C      D++A+ AP+    +V   T+  +  ++  EL GRI   R+
Sbjct: 8   PFCLLALTLALSAC------DNSAAEAPEMPLAKVRIETLAAKPLSITSELSGRIAAPRI 61

Query: 67  AQVRARVAGIVLSRNFEEGADVKAGAVLFQIDPAPFKAALSKAQGDLARTQATLFETQAT 126
           A+VRARVAG+V+ R F+EG DVK G VLF+IDPAPFKA L  AQ +L++ +A  F+ +  
Sbjct: 62  AEVRARVAGVVMQRVFKEGHDVKQGDVLFRIDPAPFKADLDSAQANLSKAEANAFQARLQ 121

Query: 127 VKRYESLVEIEAVSRQTFDTARSALQNAVAAKRSAEADVETARLNLGYATVKAPISGRIG 186
            +RY  LVE  A+S Q +D AR+A++   A   + +A VE A+LNLGYATV APISGRIG
Sbjct: 122 EQRYSQLVEGNAISGQDYDNARAAVRQTNAEVAANKAAVERAKLNLGYATVTAPISGRIG 181

Query: 187 RAMVTEGALVGQGETTLLATIQQLDPVYADFTQPAAEALQMRAAIQEGRLPKGGED---A 243
           RA+VTEGALVGQ E T LA IQQLDP++AD TQ   E   +R A + G L + G+D   A
Sbjct: 182 RALVTEGALVGQNEATPLAIIQQLDPIHADLTQSTRELNDLRRAFRAGSLKQVGQDQAKA 241

Query: 244 LSLSVDGTDYTSTGTLLFTDVAVDRTTGQVSLRARFANPKGVLLPGMYVRVRTPQRVDSN 303
             +  DG+ Y   G LLF +++VD  TGQ+ LR+ F NP   LLPG +VRVR  Q VD  
Sbjct: 242 TLIQDDGSLYPLPGKLLFAEISVDPGTGQIILRSEFPNPDLDLLPGSFVRVRLEQAVDKQ 301

Query: 304 AILVPQRAVQRSGDGAARVLVIAQDGTVEARPVKTGAMQDSRWQITEGLKAGEQVIVGNM 363
            I VPQRA+ R   G   VL++  + TV  +PV+ GA+ + RW ++ GLK G++++V  +
Sbjct: 302 GISVPQRAITRDSAGIPMVLLLDAEQTVTQQPVELGAVIEDRWIVSSGLKPGDRIVVEGL 361

Query: 364 TGLSAGDKV 372
                G+KV
Sbjct: 362 QHARPGEKV 370