Pairwise Alignments

Query, 386 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a

Subject, 397 a.a., efflux RND transporter periplasmic adaptor subunit from Pectobacterium carotovorum WPP14

 Score =  301 bits (772), Expect = 2e-86
 Identities = 163/380 (42%), Positives = 237/380 (62%), Gaps = 3/380 (0%)

Query: 10  MPAVALLAA-LGLSGCEQKQQQDHAASTAPKEVEAITVNTESFTVVDELPGRIEPVRVAQ 68
           + AV +L+  L L+GC+    Q   A     EV  +T+ TE+  V+ ELPGR    R+A+
Sbjct: 10  LAAVLMLSGGLMLAGCDSGNNQQGGAQQQMPEVGIVTLKTEALNVMTELPGRTSAYRIAE 69

Query: 69  VRARVAGIVLSRNFEEGADVKAGAVLFQIDPAPFKAALSKAQGDLARTQATLFETQATVK 128
           VR +V GI+L RNF EG+D+KAGA L+QIDPA ++A+ + A+G LA+ QA     + TV 
Sbjct: 70  VRPQVGGIILKRNFVEGSDIKAGASLYQIDPATYQASYNSAKGSLAQAQAQAEIARLTVN 129

Query: 129 RYESLVEIEAVSRQTFDTARSALQNAVAAKRSAEADVETARLNLGYATVKAPISGRIGRA 188
           RY+ L+    VS+Q +D A +  + A AA ++A+A V+TA++NL Y  V +PI GR+G++
Sbjct: 130 RYKPLLGTNYVSKQDYDQAVATSRQADAAVQAAKAAVDTAQINLAYTKVNSPIEGRVGKS 189

Query: 189 MVTEGALVGQGETTLLATIQQLDPVYADFTQPAAEALQMRAAIQEGRL--PKGGEDALSL 246
            VTEGALV  G+ T L T+QQLDP+Y D TQ + + LQ++  ++ G L   +G  +   L
Sbjct: 190 TVTEGALVATGQATALTTVQQLDPIYVDVTQSSNDFLQLKKELENGTLKQSEGKANVRLL 249

Query: 247 SVDGTDYTSTGTLLFTDVAVDRTTGQVSLRARFANPKGVLLPGMYVRVRTPQRVDSNAIL 306
             +G++Y   GTL F+DV VD TTG ++LRA F NP+  LLPGM+VR R    V+  A+L
Sbjct: 250 LENGSEYAEAGTLEFSDVTVDETTGSITLRAIFPNPQHNLLPGMFVRARLDSGVNPTALL 309

Query: 307 VPQRAVQRSGDGAARVLVIAQDGTVEARPVKTGAMQDSRWQITEGLKAGEQVIVGNMTGL 366
           VPQ+ V R   G A  +V+ +   VE R +KT      +W +TEGLKAG++VIV  +  +
Sbjct: 310 VPQQGVTRDPRGQATAMVVGEGDKVEPRTLKTSKAIGDKWLVTEGLKAGDRVIVTGLQKI 369

Query: 367 SAGDKVARKSPSAQPQAKAQ 386
             G +V  K  + + Q   Q
Sbjct: 370 RPGAQVKTKEVAPENQQAQQ 389