Pairwise Alignments

Query, 386 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a

Subject, 387 a.a., Multidrug efflux pump subunit AcrA from Methylophilus sp. DMC18

 Score =  278 bits (711), Expect = 2e-79
 Identities = 157/372 (42%), Positives = 236/372 (63%), Gaps = 6/372 (1%)

Query: 12  AVALLAALGLSGCEQKQQQDHAASTAPKEVEAITVNTESFTVVDELPGRIEPVRVAQVRA 71
           A++ L  L L+ C + ++    A  AP  VE + V         ELPGR+E  R+A+VRA
Sbjct: 10  ALSALLILQLAACSKPKEAAQPAGAAPV-VEVVKVQVADIPDEVELPGRVEAYRIAEVRA 68

Query: 72  RVAGIVLSRNFEEGADVKAGAVLFQIDPAPFKAALSKAQGDLARTQATLFETQATVKRYE 131
           RV+GIV  R ++EG  VKAG  LFQI+P   +A+  +A+ +LART+A L      ++RY+
Sbjct: 69  RVSGIVAKRLYQEGQVVKAGTPLFQINPEQLQASKLEAEAELARTEANLVNANDKLQRYQ 128

Query: 132 SLVEIEAVSRQTFDTARSALQNAVAAKRSAEADVETARLNLGYATVKAPISGRIGRAMVT 191
           +L+  ++VS++ +  A++  Q A A   SA+A +  ARL+LGYA V API G   RA+VT
Sbjct: 129 ALIGDQSVSQRDYRAAQAEAQLAKAEVASAQAKLNRARLDLGYANVTAPIDGVARRALVT 188

Query: 192 EGALVGQGETTLLATIQQLDPVYADFTQPAAEALQMRAAIQEGRLPKGGEDALSLSV--- 248
           EGALVG+ E T L T++Q++PVY +F+Q ++E   +R A+++G+L KG +    + +   
Sbjct: 189 EGALVGKDEATQLTTVEQVNPVYVNFSQSSSEVFTLRKALRDGQL-KGNDGDFKIKLVLP 247

Query: 249 DGTDYTSTGTLLFTDVAVDRTTGQVSLRARFANPKGVLLPGMYVRVRTPQRVDSNAILVP 308
           DG+ Y   G L F+DV+V++TT  V +RA F NP+ VL+PG YVR++  Q  + NAIL+P
Sbjct: 248 DGSMYAQAGKLSFSDVSVNQTTDSVVMRAIFENPQQVLMPGAYVRIKIRQATNPNAILIP 307

Query: 309 QRAVQRSGDGAARVLVIAQDGTVEARPVKTGAMQDSRWQITEGLKAGEQVIVGNMTGLSA 368
           + A+ R    + RV V+     +E+R V+ G + D +W I +GL+AGEQV+V N+   +A
Sbjct: 308 RDALMRD-QFSTRVWVVNAKNELESREVQAGRVIDKQWVIEQGLQAGEQVVVTNVAAQTA 366

Query: 369 GDKVARKSPSAQ 380
           G KV  K  SAQ
Sbjct: 367 GSKVTPKLISAQ 378