Pairwise Alignments

Query, 386 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a

Subject, 385 a.a., multidrug efflux RND transporter periplasmic adaptor subunit AcrE from Escherichia coli ECRC98

 Score =  294 bits (752), Expect = 3e-84
 Identities = 163/376 (43%), Positives = 239/376 (63%), Gaps = 8/376 (2%)

Query: 1   MSSFSDWRVMPAVALLAALGLSGCEQKQQQDHAASTAPKEVEAITVNTESFTVVDELPGR 60
           M+  + + ++P+  L++A  ++GC  K ++   A     +V    V T    V  ELPGR
Sbjct: 1   MTKHARFFLLPSFILISAALIAGCNDKGEEK--AHVGEPQVTVHIVKTAPLEVKTELPGR 58

Query: 61  IEPVRVAQVRARVAGIVLSRNFEEGADVKAGAVLFQIDPAPFKAALSKAQGDLARTQATL 120
               R+A+VR +V+GIVL+RNF EG+DV+AG  L+QIDPA ++A    A+G+LA+++A  
Sbjct: 59  TNAYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQANYDSAKGELAKSEAAA 118

Query: 121 FETQATVKRYESLVEIEAVSRQTFDTARSALQNAVAAKRSAEADVETARLNLGYATVKAP 180
                TVKRY  LV  + +S+Q +D A +  + A AA  +A+A VE+AR+NL Y  V AP
Sbjct: 119 AIAHLTVKRYVPLVGTKYISQQEYDQAIADARQADAAVIAAKATVESARINLAYTKVTAP 178

Query: 181 ISGRIGRAMVTEGALVGQGETTLLATIQQLDPVYADFTQPAAEALQMRAAIQEGRLPKGG 240
           ISGRIG++ VTEGALV  G+TT LAT+QQLDP+Y D TQ + + ++++ ++++G L K  
Sbjct: 179 ISGRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQSSNDFMRLKQSVEQGNLHK-- 236

Query: 241 EDALS----LSVDGTDYTSTGTLLFTDVAVDRTTGQVSLRARFANPKGVLLPGMYVRVRT 296
           E+A S    +  +G  Y   GTL F+DV VD +TG ++LRA F NP+  LLPGM+VR R 
Sbjct: 237 ENATSNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLRAVFPNPQHTLLPGMFVRARI 296

Query: 297 PQRVDSNAILVPQRAVQRSGDGAARVLVIAQDGTVEARPVKTGAMQDSRWQITEGLKAGE 356
            + V  +AIL+PQ+ V R+  G A VL++     VE RPV        +W I+EGLK+G+
Sbjct: 297 DEGVQPDAILIPQQGVSRTPRGDATVLIVNDKSQVEVRPVVASQAIGDKWLISEGLKSGD 356

Query: 357 QVIVGNMTGLSAGDKV 372
           QVIV  +     G++V
Sbjct: 357 QVIVSGLQKARPGEQV 372