Pairwise Alignments

Query, 386 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a

Subject, 397 a.a., multidrug efflux RND transporter periplasmic adaptor subunit AcrA from Escherichia coli ECRC98

 Score =  308 bits (788), Expect = 2e-88
 Identities = 166/373 (44%), Positives = 236/373 (63%), Gaps = 4/373 (1%)

Query: 15  LLAALGLSGCEQKQQQDHAASTAPKEVEAITVNTESFTVVDELPGRIEPVRVAQVRARVA 74
           L  +L L+GC+ KQ Q          V  +TV TE   +  ELPGR    R+A+VR +V+
Sbjct: 16  LSGSLALTGCDDKQAQQGGQQMPA--VGVVTVKTEPLQITTELPGRTSAYRIAEVRPQVS 73

Query: 75  GIVLSRNFEEGADVKAGAVLFQIDPAPFKAALSKAQGDLARTQATLFETQATVKRYESLV 134
           GI+L RNF+EG+D++AG  L+QIDPA ++A    A+GDLA+ QA     Q TV RY+ L+
Sbjct: 74  GIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLL 133

Query: 135 EIEAVSRQTFDTARSALQNAVAAKRSAEADVETARLNLGYATVKAPISGRIGRAMVTEGA 194
             + +S+Q +D A +  Q A AA  +A+A VETAR+NL Y  V +PISGRIG++ VTEGA
Sbjct: 134 GTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGA 193

Query: 195 LVGQGETTLLATIQQLDPVYADFTQPAAEALQMRAAIQEGRL-PKGGEDALSL-SVDGTD 252
           LV  G+ T LAT+QQLDP+Y D TQ + + L+++  +  G L  + G+  +SL + DG  
Sbjct: 194 LVQNGQATALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQENGKAKVSLITSDGIK 253

Query: 253 YTSTGTLLFTDVAVDRTTGQVSLRARFANPKGVLLPGMYVRVRTPQRVDSNAILVPQRAV 312
           +   GTL F+DV VD+TTG ++LRA F NP   LLPGM+VR R  + ++ NAILVPQ+ V
Sbjct: 254 FPQDGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGV 313

Query: 313 QRSGDGAARVLVIAQDGTVEARPVKTGAMQDSRWQITEGLKAGEQVIVGNMTGLSAGDKV 372
            R+  G A VLV+  D  VE RP+        +W +TEGLKAG++V++  +  +  G +V
Sbjct: 314 TRTPRGDATVLVVGADDKVETRPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQV 373

Query: 373 ARKSPSAQPQAKA 385
             +  +A    +A
Sbjct: 374 KAQEVTADNNQQA 386