Pairwise Alignments
Query, 710 a.a., PAS from Pseudomonas syringae pv. syringae B728a
Subject, 451 a.a., Biofilm dispersion protein BdlA from Pseudomonas sp. RS175
Score = 319 bits (818), Expect = 2e-91
Identities = 169/422 (40%), Positives = 255/422 (60%), Gaps = 20/422 (4%)
Query: 265 GKVTAIERSQAVIEFDLTGKVLHANRNFLAVFGYDLDEIVGEHHRMFCSEEFVSSLQYRE 324
G V A+ERS AV+EF GKVL AN NFL GY +++ HR FC+ S +YRE
Sbjct: 22 GLVGALERSMAVVEFSPDGKVLRANENFLNTMGYRAEQLASLSHRDFCTPALAGSAEYRE 81
Query: 325 LWEKLGRGEYDANEYKRKRKDGKEIWIQATYNPIFDAQGKPYKIVKFALDVTVAKETSVE 384
W +L G++ + ++R+ G+ +W++A+YNP+ D + K+VK+ALDVT E
Sbjct: 82 FWNQLRAGQFVSGTFQRRSGRGQNVWLEASYNPVVDEHNRVVKVVKYALDVTAKVANEAE 141
Query: 385 DQGKVNAIDRAQAVIEFDMAGNIITANANFLKALGYGLLEIKGKHHRIFCEEEYVRGTEY 444
+GK+ A+DRA AVIEFD++G+I+TAN NFL+ + Y L E++GKHHR+FCE V +EY
Sbjct: 142 IRGKLAALDRAMAVIEFDLSGHILTANDNFLRVMNYNLTELQGKHHRMFCEPNLVSSSEY 201
Query: 445 REFWHGLGQGEFYSGRFMRVSKYGQKIWIQATYSPIFDHDGLPFKVVKFATDITRQVE-M 503
+FW L GEF+SG++ R+ K+G+ +W++A+Y+P++D +G K+VKFA+DIT +VE
Sbjct: 202 SDFWRRLNAGEFFSGQYKRLGKHGKVVWLEASYNPVYDAEGKLCKIVKFASDITERVEKF 261
Query: 504 EQAIEAKTRAMGESVKALMNAISYVAQSTETATDLARMTREQARSGSQTLVKASDAMGMI 563
E+ +RA S + + E ++ T ++ R + + ++ +G +
Sbjct: 262 EEDSRGASRAYHISAE--------TERVAEQGAEVIHQTAKEMRQIADNIGASARLVGQL 313
Query: 564 AKSAEGIQDIIQVISEIASQTNMLAFNAAIEAARAGEHGLGFSVVADEVRKLAEKSSRAT 623
+E I I+ I IA QTN+LA NAAIEAARAG+ G GF+VVADEVR+LA ++SR+T
Sbjct: 314 GSRSEEITAIVNTIRGIADQTNLLALNAAIEAARAGDQGRGFAVVADEVRQLAGRTSRST 373
Query: 624 KEINKLI----LETVSRIESGNEISRS-------AGEAFEHIVEGVMQTTQAIDGINTAT 672
EI ++I ET + S N A +A IV+ TT A++ ++
Sbjct: 374 AEIAEMIGMILSETREAVASMNVTHEGALRGVTLADQAGSVIVQIRTGTTDALEAVSMFA 433
Query: 673 EK 674
K
Sbjct: 434 SK 435
Score = 266 bits (679), Expect = 2e-75
Identities = 118/234 (50%), Positives = 169/234 (72%)
Query: 22 LMTAIDRSQAMIEFDLDGNILRANTNFLDCVGYRLDEVQGRHHRMFCTPEHASSVEYVTF 81
L+ A++RS A++EF DG +LRAN NFL+ +GYR +++ HR FCTP A S EY F
Sbjct: 23 LVGALERSMAVVEFSPDGKVLRANENFLNTMGYRAEQLASLSHRDFCTPALAGSAEYREF 82
Query: 82 WEKLGKGAFDEGQYKRLGKNGREIWLQATYNPVFDEQGNPFKVVKFATDVTAQRKSNAEY 141
W +L G F G ++R G+ +WL+A+YNPV DE KVVK+A DVTA+ + AE
Sbjct: 83 WNQLRAGQFVSGTFQRRSGRGQNVWLEASYNPVVDEHNRVVKVVKYALDVTAKVANEAEI 142
Query: 142 EGKVAAIDRSQGIIEFDLNGRVLNANENFLKVLGYRLDEIQGQHHRMFCEDDYLNSPAYR 201
GK+AA+DR+ +IEFDL+G +L AN+NFL+V+ Y L E+QG+HHRMFCE + ++S Y
Sbjct: 143 RGKLAALDRAMAVIEFDLSGHILTANDNFLRVMNYNLTELQGKHHRMFCEPNLVSSSEYS 202
Query: 202 AFWAKLERGEYDSGEYKRIGKNGRELWISATYNPIFDPDGRPYKVVKFANDVTE 255
FW +L GE+ SG+YKR+GK+G+ +W+ A+YNP++D +G+ K+VKFA+D+TE
Sbjct: 203 DFWRRLNAGEFFSGQYKRLGKHGKVVWLEASYNPVYDAEGKLCKIVKFASDITE 256
Score = 251 bits (640), Expect = 7e-71
Identities = 119/263 (45%), Positives = 171/263 (65%), Gaps = 2/263 (0%)
Query: 123 KVVKFATDVTAQRKSNAEYEGKVAAIDRSQGIIEFDLNGRVLNANENFLKVLGYRLDEIQ 182
K++K +++TA+ Y+G V A++RS ++EF +G+VL ANENFL +GYR +++
Sbjct: 4 KILK--SELTARTAELTTYKGLVGALERSMAVVEFSPDGKVLRANENFLNTMGYRAEQLA 61
Query: 183 GQHHRMFCEDDYLNSPAYRAFWAKLERGEYDSGEYKRIGKNGRELWISATYNPIFDPDGR 242
HR FC S YR FW +L G++ SG ++R G+ +W+ A+YNP+ D R
Sbjct: 62 SLSHRDFCTPALAGSAEYREFWNQLRAGQFVSGTFQRRSGRGQNVWLEASYNPVVDEHNR 121
Query: 243 PYKVVKFANDVTESRIRQAESAGKVTAIERSQAVIEFDLTGKVLHANRNFLAVFGYDLDE 302
KVVK+A DVT +AE GK+ A++R+ AVIEFDL+G +L AN NFL V Y+L E
Sbjct: 122 VVKVVKYALDVTAKVANEAEIRGKLAALDRAMAVIEFDLSGHILTANDNFLRVMNYNLTE 181
Query: 303 IVGEHHRMFCSEEFVSSLQYRELWEKLGRGEYDANEYKRKRKDGKEIWIQATYNPIFDAQ 362
+ G+HHRMFC VSS +Y + W +L GE+ + +YKR K GK +W++A+YNP++DA+
Sbjct: 182 LQGKHHRMFCEPNLVSSSEYSDFWRRLNAGEFFSGQYKRLGKHGKVVWLEASYNPVYDAE 241
Query: 363 GKPYKIVKFALDVTVAKETSVED 385
GK KIVKFA D+T E ED
Sbjct: 242 GKLCKIVKFASDITERVEKFEED 264
Score = 145 bits (365), Expect = 5e-39
Identities = 65/121 (53%), Positives = 86/121 (71%)
Query: 12 KAGLELDLHSLMTAIDRSQAMIEFDLDGNILRANTNFLDCVGYRLDEVQGRHHRMFCTPE 71
K E ++ + A+DR+ A+IEFDL G+IL AN NFL + Y L E+QG+HHRMFC P
Sbjct: 135 KVANEAEIRGKLAALDRAMAVIEFDLSGHILTANDNFLRVMNYNLTELQGKHHRMFCEPN 194
Query: 72 HASSVEYVTFWEKLGKGAFDEGQYKRLGKNGREIWLQATYNPVFDEQGNPFKVVKFATDV 131
SS EY FW +L G F GQYKRLGK+G+ +WL+A+YNPV+D +G K+VKFA+D+
Sbjct: 195 LVSSSEYSDFWRRLNAGEFFSGQYKRLGKHGKVVWLEASYNPVYDAEGKLCKIVKFASDI 254
Query: 132 T 132
T
Sbjct: 255 T 255
Score = 115 bits (289), Expect = 4e-30
Identities = 59/155 (38%), Positives = 87/155 (56%), Gaps = 2/155 (1%)
Query: 367 KIVKFALDVTVAKETSVEDQGKVNAIDRAQAVIEFDMAGNIITANANFLKALGYGLLEIK 426
KI+K L A+ T+ + G V A++R+ AV+EF G ++ AN NFL +GY ++
Sbjct: 4 KILKSELTARTAELTTYK--GLVGALERSMAVVEFSPDGKVLRANENFLNTMGYRAEQLA 61
Query: 427 GKHHRIFCEEEYVRGTEYREFWHGLGQGEFYSGRFMRVSKYGQKIWIQATYSPIFDHDGL 486
HR FC EYREFW+ L G+F SG F R S GQ +W++A+Y+P+ D
Sbjct: 62 SLSHRDFCTPALAGSAEYREFWNQLRAGQFVSGTFQRRSGRGQNVWLEASYNPVVDEHNR 121
Query: 487 PFKVVKFATDITRQVEMEQAIEAKTRAMGESVKAL 521
KVVK+A D+T +V E I K A+ ++ +
Sbjct: 122 VVKVVKYALDVTAKVANEAEIRGKLAALDRAMAVI 156