Pairwise Alignments

Query, 710 a.a., PAS from Pseudomonas syringae pv. syringae B728a

Subject, 578 a.a., sensory methylation accepting chemotaxis protein from Agrobacterium fabrum C58

 Score =  334 bits (857), Expect = 6e-96
 Identities = 201/551 (36%), Positives = 293/551 (53%), Gaps = 62/551 (11%)

Query: 147 AIDRSQGIIEFDLNGRVLNANENFLKVLGYRLDEIQGQHHRMFCEDDYLNSPAYRAFWAK 206
           A+ RSQ IIEFDL G++L AN+NF K +GY+  EI G+ H +F   +   SP Y+AFWAK
Sbjct: 17  ALSRSQAIIEFDLTGKILKANDNFCKAVGYQPSEIVGRTHSIFLSSEDAASPEYKAFWAK 76

Query: 207 LERGEYDSGEYKRIGKNGRELWISATYNPIFDPDGRPYKVVKFANDVTESRIRQAESAGK 266
           L RGEYD G+Y+R  KNG E+WI A+YNP+F   G+PYKVVK A D+T  + + AE  GK
Sbjct: 77  LSRGEYDQGQYRRQAKNGDEIWIEASYNPVFR-FGKPYKVVKIATDITVIKRKSAEDDGK 135

Query: 267 VTAIERSQAVIEFDLTGKVLHANRNFLAVFGYDLDEIVGEHHRMFCSEEFVSSLQYRELW 326
           + A+ R+QA+IEF   GK+L AN NFL    Y  +EI+G+HH +FC   +  S  YR+ W
Sbjct: 136 LAALSRAQAMIEFTPDGKILGANENFLTTLDYTAEEIIGKHHSIFCEPAYAQSQDYRDFW 195

Query: 327 EKLGRGEYDANEYKRKRKDGKEIWIQATYNPIFDAQGKPYKIVKFALDVTVAKETSVEDQ 386
           ++LGRG +   ++ R  KD K ++IQA+YNPI D +G+ +K+VKFA DVT          
Sbjct: 196 KELGRGHFSTGQFMRLGKDNKRVFIQASYNPIIDDRGRVFKVVKFAFDVT---------- 245

Query: 387 GKVNAIDRAQAVIEFDMAGNIITANANFLKALGYGLLEIKGKHHRIFCEEEYVRGTEYRE 446
                 DR  AV E                 LG  L  +   + R+  ++ +V       
Sbjct: 246 ------DRVHAVEE-----------------LGAALERLSQCNIRVTLDKPFV------- 275

Query: 447 FWHGLGQGEFYSGRFMRVSKYGQK--IWIQATYSPIFDHDGLPFKVVKFATDITR-QVEM 503
                       G F R+ +   K     Q T   +    G    + + + +++   V +
Sbjct: 276 ------------GEFERLRQDFNKSIAEFQKTLENVLGQTG---DLTRSSQEVSEASVNL 320

Query: 504 EQAIEAKTRAMGESVKALMNAISYVAQSTETATD---LARMTREQARSGSQTLVKASDAM 560
            +    +  A+ E+  AL    + V  STE   +   L +  R    + ++ + +  DAM
Sbjct: 321 AERSREQAVALEETSAALEEITATVRSSTENMKETRKLVQSARASTVASTEVVERTVDAM 380

Query: 561 GMIAKSAEGIQDIIQVISEIASQTNMLAFNAAIEAARAGEHGLGFSVVADEVRKLAEKSS 620
             I  ++  I  II VI EIA QTN+LA NA +EAARAG+ G GF+VVA EVR+LA++S+
Sbjct: 381 QRIETASREISQIIGVIDEIAFQTNLLALNAGVEAARAGDAGKGFAVVAQEVRELAQRSA 440

Query: 621 RATKEINKLILETVSRIESGNEISRSAGEAFEHIVEGVMQTTQAIDGINTATEKQRLSAQ 680
            A KEI  LI  + + +  G  +    GEA + I   V      +D I+ A ++Q     
Sbjct: 441 SAAKEIKALINNSGTEVLEGVRLVGETGEALKQIDSLVRHIDGNVDTISKAADEQAAGIS 500

Query: 681 EVETLIVELHK 691
           E+   +  L +
Sbjct: 501 EINKAVNRLDR 511



 Score =  269 bits (688), Expect = 2e-76
 Identities = 146/319 (45%), Positives = 206/319 (64%), Gaps = 14/319 (4%)

Query: 8   THRDKAGLELDLHSLMTAIDRSQAMIEFDLDGNILRANTNFLDCVGYRLDEVQGRHHRMF 67
           +H  K GL  D  +++ A+ RSQA+IEFDL G IL+AN NF   VGY+  E+ GR H +F
Sbjct: 2   SHFSKFGL--DASAVLDALSRSQAIIEFDLTGKILKANDNFCKAVGYQPSEIVGRTHSIF 59

Query: 68  CTPEHASSVEYVTFWEKLGKGAFDEGQYKRLGKNGREIWLQATYNPVFDEQGNPFKVVKF 127
            + E A+S EY  FW KL +G +D+GQY+R  KNG EIW++A+YNPVF   G P+KVVK 
Sbjct: 60  LSSEDAASPEYKAFWAKLSRGEYDQGQYRRQAKNGDEIWIEASYNPVF-RFGKPYKVVKI 118

Query: 128 ATDVTAQRKSNAEYEGKVAAIDRSQGIIEFDLNGRVLNANENFLKVLGYRLDEIQGQHHR 187
           ATD+T  ++ +AE +GK+AA+ R+Q +IEF  +G++L ANENFL  L Y  +EI G+HH 
Sbjct: 119 ATDITVIKRKSAEDDGKLAALSRAQAMIEFTPDGKILGANENFLTTLDYTAEEIIGKHHS 178

Query: 188 MFCEDDYLNSPAYRAFWAKLERGEYDSGEYKRIGKNGRELWISATYNPIFDPDGRPYKVV 247
           +FCE  Y  S  YR FW +L RG + +G++ R+GK+ + ++I A+YNPI D  GR +KVV
Sbjct: 179 IFCEPAYAQSQDYRDFWKELGRGHFSTGQFMRLGKDNKRVFIQASYNPIIDDRGRVFKVV 238

Query: 248 KFANDVTESRIRQAESAGKVTAIER-SQAVIEFDL----TGKVLHANRNF---LAVFGYD 299
           KFA DVT+ R+   E  G   A+ER SQ  I   L     G+     ++F   +A F   
Sbjct: 239 KFAFDVTD-RVHAVEELG--AALERLSQCNIRVTLDKPFVGEFERLRQDFNKSIAEFQKT 295

Query: 300 LDEIVGEHHRMFCSEEFVS 318
           L+ ++G+   +  S + VS
Sbjct: 296 LENVLGQTGDLTRSSQEVS 314