Pairwise Alignments

Query, 393 a.a., amino acid/amide ABC transporter substrate-binding protein, HAAT family from Pseudomonas syringae pv. syringae B728a

Subject, 422 a.a., Urea ABC transporter, substrate-binding protein UrtA from Variovorax sp. SCN45

 Score =  304 bits (779), Expect = 3e-87
 Identities = 170/397 (42%), Positives = 246/397 (61%), Gaps = 24/397 (6%)

Query: 12  ALLLGAISLLPFALIGQAQADEAVKVGIIHSLTGTMAISEASVVDAEKLAIEEINASGGV 71
           A LL +IS  P      A A + +KVG++HSL+GTMAISE  + D   +AI++IN  GGV
Sbjct: 13  AALLASISAAP------AFAADTIKVGVLHSLSGTMAISETVLKDTVLMAIDDINKKGGV 66

Query: 72  MGKTIEPIVEDGASDWPTFAEKARKLLENDHVAVTFGAFTSASRKAVLPVFERNKGLLYY 131
           +GK +EP+V D AS+WP FAEK ++LL  D V+V FG +TS SRK+VLPV E   GLL+Y
Sbjct: 67  LGKQLEPVVVDPASNWPLFAEKTKQLLGQDKVSVIFGCWTSVSRKSVLPVVEEMNGLLFY 126

Query: 132 PTFYEGLEKSPAIIYTGAEASQQTLAAVTWLMANKG---KSVYLVGSDYIWPRTTNKLAR 188
           P  YEG E S  + YTGA  +QQ + AV +LM+ +G   K   L+G+DY++PRTTNK+ R
Sbjct: 127 PVQYEGEELSKNVFYTGAAPNQQAIPAVDYLMSKEGGGAKRWVLLGTDYVYPRTTNKILR 186

Query: 189 ASVTKQG--GSIVGEDYLPLGAIEFSSV---INKIKAAKPDIVLSTIVGGSNVAFYKQLK 243
           A +  +G   S + E Y P G  ++ ++   I K  A     V+STI G SNV FYK+L 
Sbjct: 187 AYLKSKGVKESDIDEKYTPFGHSDYQTIVADIKKFSAGGKTAVVSTINGDSNVPFYKELG 246

Query: 244 AAGIDSSNQTLMGLAITEEEVTGIGAENLVGFLTCMSYFQSLKNPVNEKFVQAFKTRYGQ 303
            AG+ + +  ++  ++ EEE+ G+  + LVG L   +YF SLKNP N  F++ +      
Sbjct: 247 NAGLKAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFMSLKNPTNTAFIKEWSEYAKA 306

Query: 304 QRVVG--------DPMAAAYTAVYLWKKAVEKAGSFEVPKVIAASSEMTLDAPEGEI-KV 354
           +++ G        DPM A +  +++WK+AVEKA S +  KVIAA +  T  AP G + K+
Sbjct: 307 KKIPGHMDKPLTNDPMEATWIGIHMWKQAVEKAKSTDTDKVIAAMAGQTFTAPSGIVSKM 366

Query: 355 HKDNHHLWKRARIGTLNAQGQVDVIYES-APIEPNPF 390
            + NHHL K   IG + A GQ +V++++  P++  P+
Sbjct: 367 DEKNHHLHKSVFIGEIKADGQFNVVWKTPGPVKAKPW 403