Pairwise Alignments

Query, 393 a.a., amino acid/amide ABC transporter substrate-binding protein, HAAT family from Pseudomonas syringae pv. syringae B728a

Subject, 425 a.a., Urea ABC transporter, urea binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  400 bits (1028), Expect = e-116
 Identities = 215/403 (53%), Positives = 272/403 (67%), Gaps = 18/403 (4%)

Query: 6   RRLIKHALLLGAISLLPFALIGQAQA----------DEAVKVGIIHSLTGTMAISEASVV 55
           RR +   L +  ++ LP    GQ  A          D  V VG +HS TGTMAISE   +
Sbjct: 22  RRRVLQMLGVAGLAGLPAWSFGQPTASVNTTKLAVTDTEVTVGQLHSSTGTMAISETGSI 81

Query: 56  DAEKLAIEEINASGGVMGKTIEPIVEDGASDWPTFAEKARKLLENDHVAVTFGAFTSASR 115
            AE+LAI+EINA GG++G+ I+ I EDGASDWPTFAEK++KLL ND  A  FG +TSASR
Sbjct: 82  QAEQLAIDEINAMGGILGRKIKVIKEDGASDWPTFAEKSKKLLINDRCAAVFGCWTSASR 141

Query: 116 KAVLPVFERNKGLLYYPTFYEGLEKSPAIIYTGAEASQQTLAAVTWLM-ANKGKSVYLVG 174
           KAVLPVFE+  GLLYYPTFYEGLE+S  +IYTG EA+QQ L ++ W     K K+ +L+G
Sbjct: 142 KAVLPVFEKENGLLYYPTFYEGLEQSKNVIYTGQEATQQILYSLDWAQKEKKAKTFFLIG 201

Query: 175 SDYIWPRTTNKLARASVTK-QGGSIVGEDYLPLGAIEFSSVINKIKAAKPDIVLSTIVGG 233
           SDYIWPRT+ K+AR  +   Q G +VGE+Y PLG+  F S++NKIK  KPD +   +VGG
Sbjct: 202 SDYIWPRTSMKIARKHIENFQKGKVVGEEYYPLGSTNFGSLMNKIKLQKPDCIFCAVVGG 261

Query: 234 SNVAFYKQLKAAGIDSSNQTLMGLAITEEEVTGIGAENLVGFLTCMSYFQSLKNPVNEKF 293
           SNVAFYK LKAAGI    Q L+ L++TE+E+TG+G EN  GF + M YFQ+L N  N+KF
Sbjct: 262 SNVAFYKALKAAGITGDKQLLVTLSVTEDEMTGVGGENFAGFYSSMKYFQTLDNANNKKF 321

Query: 294 VQAFKTRYGQQRVVGDPMAAAYTAVYLWKKAVEKAGSFEVPKVIAASS---EMTLDAPEG 350
           V AFK +YG+  V+GD   A Y   +LWK AVEKA SF+V KV+AAS    E+T  APEG
Sbjct: 322 VAAFKAKYGKDAVIGDVTQAGYLGPWLWKAAVEKAKSFDVDKVVAASRTGIELT-TAPEG 380

Query: 351 EIKVHKDNHHLWKRARIGTLNAQGQVDVIYESAP-IEPNPFPK 392
            +K+   NHHLW ++RI          V+ ES   I+P+PFPK
Sbjct: 381 YVKL-DPNHHLWSKSRIAMGMPDATFKVVAESPELIKPDPFPK 422