Pairwise Alignments

Query, 338 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a

Subject, 333 a.a., ribose operon transcriptional repressor RbsR from Serratia liquefaciens MT49

 Score =  255 bits (651), Expect = 1e-72
 Identities = 140/331 (42%), Positives = 212/331 (64%), Gaps = 5/331 (1%)

Query: 1   MATIKDVAALAGISYTTVSHVLNNTRPVSEPVRLKVEAAIAQLDYVPSAVARSLKAKTTS 60
           MAT+KDVA LAG+S +TVSHV+NN R VS+ VR K+ AAI QL+Y PSA+ARSLK   T 
Sbjct: 1   MATMKDVARLAGVSTSTVSHVINNNRFVSDSVRAKIMAAIEQLNYAPSALARSLKLNQTR 60

Query: 61  TIGLLIPNGMNPYFAELARGIEDYCERNGFCVILCNSDDNPEKQRGYLRVLLEKRVDGLI 120
           TIG+L+ +  NP++AE+ RG+E  C   G+ +ILCN++++  +    +  LL+KRVDGL+
Sbjct: 61  TIGMLVTSSNNPFYAEVVRGVERSCYERGYSLILCNTEEDAARMNRNMETLLQKRVDGLL 120

Query: 121 VSSVGGDAGIAGGLAEVRT-PLVIVD-RELDGIDADMVRIDHEQGAYLATRHLLDLGHRA 178
           +            L+   + P+V++D    +G + D+++ +   G  +AT HL+  G+R 
Sbjct: 121 LMCTENHRPSQDALSRYPSLPIVMMDWAPFEGAN-DIIQDNSLLGGEMATDHLIARGYRK 179

Query: 179 IACIGGPFHSTVAEMRLAGYRRALQQASVPVRAEWALHSEFTSSAGHEAACQLLA-AHPP 237
           IACI GP   T A  RL GYR A+Q+A + +   + +H +F    G  A  QLLA A PP
Sbjct: 180 IACIAGPQDKTTARHRLEGYRSAMQRAGLAILPGYEVHCDFEFEGGVIAMKQLLALAEPP 239

Query: 238 TAIFAGNDVIAIGVLRAAAERLIRVPQDLSVIGFDDIQMSRYVYPALTTVGQSIMQLGET 297
            A+FAGND +A+G  +A  +  + VPQD++V+G+DDI++++Y+ P L+T+ Q    LGE 
Sbjct: 240 HAVFAGNDAVAVGAYQALYQAGLSVPQDMAVMGYDDIELAKYLAPPLSTIHQPKDSLGEL 299

Query: 298 AAEMLLSRIATPHALPAEKRLVTPSVVVRES 328
           A + L++R+  P    A+  ++TP +V R S
Sbjct: 300 AIDALINRLQNPER-EAQVLVLTPELVERAS 329