Pairwise Alignments

Query, 338 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a

Subject, 341 a.a., LacI family DNA-binding transcriptional regulator from Serratia liquefaciens MT49

 Score =  202 bits (513), Expect = 1e-56
 Identities = 118/328 (35%), Positives = 192/328 (58%), Gaps = 3/328 (0%)

Query: 3   TIKDVAALAGISYTTVSHVLNNTRPVSEPVRLKVEAAIAQLDYVPSAVARSLKAKTTSTI 62
           T+ DVAA A +S  TVS VL N   +S+  R +V +AI  L YV +  A +L+ ++++ +
Sbjct: 5   TLADVAAYAKVSTATVSMVLRNRGRISDETRKRVLSAIDHLGYVYNQTAANLRNRSSNQV 64

Query: 63  GLLIPNGMNPYFAELARGIEDYCERNGFCVILCNSDDNPEKQRGYLRVLLEKRVDGLIVS 122
           GLL+ +  NP++AE+  G+    ER+   + L NS+++ ++Q+ ++  LL+    G+++ 
Sbjct: 65  GLLLHDITNPFYAEMTAGLSQEMERHQLMLFLANSEESADRQQKFVDSLLQNSASGMVLC 124

Query: 123 SVGGDAGIA-GGLAEVRTPLVIVDRELDGIDADMVRIDHEQGAYLATRHLLDLGHRAIAC 181
           +      +    L   + P ++V R +     D V  D+  G  LAT+HLLDLGHR IA 
Sbjct: 125 AARQTPSLFFETLKRRKIPAIMVVRPVADAHFDFVGTDNFLGTQLATQHLLDLGHRNIAF 184

Query: 182 IGGPFHSTVAEMRLAGYRRALQQASVPVRAEWALHSEFTSSAGHEAACQLLAAHPP-TAI 240
           IGG  +ST    RL GY   L +  + V+ EW + SE + S+G +AA QLL AHP  TA 
Sbjct: 185 IGGSINSTTRAQRLGGYTSKLLERGIVVKGEWIVDSEASQSSGAKAAEQLLMAHPEITAA 244

Query: 241 FAGNDVIAIGVLRAAAERLIRVPQDLSVIGFDDIQMSRYVYPALTTVGQSIMQLGETAAE 300
               D++A+GV++   +   ++ +D ++IGFDDI  +  V P LTTV  +  ++G  A E
Sbjct: 245 LCYQDIVALGVMQTLRKLDRQIGRDFALIGFDDITEASLVQPGLTTVSVASREIGRKAGE 304

Query: 301 MLLSRIATPHALPAEKRLVTPSVVVRES 328
           +L SRI   +  P ++ ++ PS+V+R+S
Sbjct: 305 LLYSRI-QGNDEPPKRIILPPSLVIRQS 331