Pairwise Alignments
Query, 479 a.a., transcriptional regulator, GntR family from Pseudomonas syringae pv. syringae B728a
Subject, 470 a.a., Uncharacterized HTH-type transcriptional regulator YjiR from Escherichia coli ECRC101
Score = 343 bits (881), Expect = 6e-99 Identities = 176/459 (38%), Positives = 279/459 (60%) Query: 7 YQRIAQQLAEDIRRGVYQPGERVPSVRKMSSQLNVSHATVLQAYANLEDQGLIRARPQSG 66 YQ +A LAE I +G+Y+ GE++PSVR +S + VS +TV QAY LE LI +P+SG Sbjct: 4 YQHLATLLAERIEQGLYRHGEKLPSVRSLSQEHGVSISTVQQAYQTLETMKLITPQPRSG 63 Query: 67 YYVHQTPALTASTPDIARVERPGLVTRSSIIQQVLEESRREGVFALGAAVPHVDYLPVRA 126 Y+V Q A P V+RP +T+ ++ +L + L + P V+ ++ Sbjct: 64 YFVAQRKAQPPVPPMTRPVQRPVEITQWDLVLDMLVAHSDSSIVPLSKSTPDVETPSLKP 123 Query: 127 LHQQLAKVTRFHSPRAFSYMFSPGFEPLRRQVAIRMRDAGVVVDPSEVVITHGCVDALQM 186 L ++L++V + + Y G LR QVA M D+G VV +++IT GC +++ + Sbjct: 124 LWRELSRVVQHNLQTVLGYDLLAGQRVLREQVARLMLDSGSVVTADDIIITSGCHNSMSL 183 Query: 187 ALRVLTRPGDLIAAESPAYYGLLQLADLLGLKVIEIPSDPATGISLEALQLAANQWSIKA 246 AL + +PGD++A ESP YYG +Q+ +G+KVIEIP+DP TGIS+EAL+LA QW IK Sbjct: 184 ALMAVCKPGDIVAVESPCYYGSMQMLRGMGVKVIEIPTDPETGISVEALELALEQWPIKG 243 Query: 247 LVLTSRLSNPLGGTMPEERQKNLLRLTSDFDIQVVEDDVYGELMFEVGRTKALKAFDRLG 306 ++L +NPLG MP+ R++ +L L DI + EDDVYGEL E R + + ++D G Sbjct: 244 IILVPNCNNPLGFIMPDARKRAVLSLAQRHDIVIFEDDVYGELATEYPRPRTIHSWDIDG 303 Query: 307 RVIYCSSFSKTLSPGVRIGWMIAGKYQAEIQRLQTFSTHSACSVTQMAVAAYLENGGYDR 366 RV+ CSSFSK+++PG+R+GW+ G+Y ++ ++ + TQMA A ++ G Y R Sbjct: 304 RVLLCSSFSKSIAPGLRVGWVAPGRYHDKLMHMKYAISSFNVPSTQMAAATFVLEGHYHR 363 Query: 367 HLRFIRLEYRKNLSAYQLAVQQFFPEGTQMSRPAGGFILWVSLPGRVNTQELHVRALEQG 426 H+R +R Y++NL+ Y ++++FP ++RP GGF+LW+ LP +V+ + + Sbjct: 364 HIRRMRQIYQRNLALYTCWIREYFPCEICITRPKGGFLLWIELPEQVDMVCVTRQLCRMK 423 Query: 427 ISIAPGLIFSNTEQFNHCIRLNCGMKWNKEAERALMTLG 465 I +A G IFS + ++ +C+R+NC + ++ AL +G Sbjct: 424 IQVAAGSIFSASGKYRNCLRINCALPLSETYREALKQIG 462