Pairwise Alignments

Query, 288 a.a., carbohydrate ABC transporter membrane protein 1, CUT1 family from Pseudomonas syringae pv. syringae B728a

Subject, 288 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  533 bits (1374), Expect = e-156
 Identities = 260/288 (90%), Positives = 274/288 (95%), Gaps = 1/288 (0%)

Query: 1   MRKVQNNKAWWLVMPVFLLVAFSAIIPMMTVVNYSVQDIFDQSSRYFVGTDWFRQVLQDP 60
           M KVQNNKAWWLV+PVFLLVAFSA+IPMMTVVNYSVQDIFDQSSRYFVG DW++QVL DP
Sbjct: 1   MNKVQNNKAWWLVLPVFLLVAFSAVIPMMTVVNYSVQDIFDQSSRYFVGADWYKQVLLDP 60

Query: 61  RLHDSLLRQFIYSGCVLLIEIPLGIAIALTMPTKGRWSSLCLIVMTIPLLIPWNVVGTIW 120
           RLHDSLLRQFIYS CVLLIEIPLGIAIALTMPTKGRWSSL LI++ IPLLIPWNVVGTIW
Sbjct: 61  RLHDSLLRQFIYSACVLLIEIPLGIAIALTMPTKGRWSSLVLIILAIPLLIPWNVVGTIW 120

Query: 121 QIFGRGDIGLLGYTLNNVLGINYNYAANASDAWVTVLVIDVWHWTSLVALLCYSGLRAIP 180
           QIFGR DIGLLGY+LN  LGI+YNYAAN  DAWVTVLV+DVWHWTSLVALLCYSGLRAIP
Sbjct: 121 QIFGRADIGLLGYSLN-ALGISYNYAANTMDAWVTVLVMDVWHWTSLVALLCYSGLRAIP 179

Query: 181 DVYYQAARIDRASGWAIFRHIQLPKMKSVLLIAVMLRFMDSFMIYTEPFVLTGGGPGNST 240
           DVYYQAARIDRAS WA+FRHIQLPKMKSVLLIAVMLRFMDSFMIYTEPFVLTGGGPGN+T
Sbjct: 180 DVYYQAARIDRASPWAVFRHIQLPKMKSVLLIAVMLRFMDSFMIYTEPFVLTGGGPGNAT 239

Query: 241 TFLSQTLTTMALGQFDLGPAAAFSLVYFLIILLVSWVFYTAMTHSEKN 288
           TFLSQTLT MA+GQFDLGPAAAFSLVYFLIILLVSW+FYTAMTHS+ N
Sbjct: 240 TFLSQTLTQMAVGQFDLGPAAAFSLVYFLIILLVSWLFYTAMTHSDAN 287