Pairwise Alignments

Query, 288 a.a., carbohydrate ABC transporter membrane protein 1, CUT1 family from Pseudomonas syringae pv. syringae B728a

Subject, 297 a.a., ABC transporter for D-Mannitol and D-Sorbitol, permease component 2 (from data) from Pseudomonas simiae WCS417

 Score =  100 bits (248), Expect = 5e-26
 Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 16/273 (5%)

Query: 7   NKAWWLVMPVFLLVAFSAIIPMMTVVNYSV--QDIFDQSSRYFVGTDWFRQVLQDPRLHD 64
           N  W+LV P   L+    I+P+   + +S+   ++       FVG + F   + D     
Sbjct: 12  NPGWFLVSPSVALLLLWMIVPLGMTLYFSLIRYNLLYPGENEFVGLENFTYFITDSGFLP 71

Query: 65  SLLRQFIYSGCVLLIEIPLGIAI-ALTMPTKGRWSSLCLIVMTIPLLIPWNVVGTIWQIF 123
                 +  G VLLI +  G+ I AL   ++     L  +++  P  I   V   IW+  
Sbjct: 72  GATNTLLLVGSVLLISVVFGVLISALLEASEFLGRGLVRVLLISPFFIMPTVGALIWK-- 129

Query: 124 GRGDIGLLGYTLNNVLGINYNYAANASDAWV------TVLVIDVWHWTSLVALLCYSGLR 177
                 L+ + ++ +L   + +       W+      ++++I  W W     LL  + ++
Sbjct: 130 -----NLIFHPVSGILAAVWKFFGAEPVDWLAHYPLLSIIIIVSWQWLPFAILLLMTAMQ 184

Query: 178 AIPDVYYQAARIDRASGWAIFRHIQLPKMKSVLLIAVMLRFMDSFMIYTEPFVLTGGGPG 237
           ++     +AAR+D A   AIF H+ LP +   + + VM+  +    ++ E F  T GGPG
Sbjct: 185 SLDQEQKEAARLDGAGAIAIFWHLTLPHLARPIAVVVMIETIFLLSVFAEIFTTTNGGPG 244

Query: 238 NSTTFLSQTLTTMALGQFDLGPAAAFSLVYFLI 270
            ++T L+  +   AL QFD+G A+A  L+  +I
Sbjct: 245 YASTNLAYLIYNQALVQFDVGMASAGGLIAVVI 277