Pairwise Alignments

Query, 414 a.a., Exodeoxyribonuclease I subunit D from Pseudomonas syringae pv. syringae B728a

Subject, 400 a.a., exonuclease, dsDNA, ATP-dependent from Escherichia coli BL21

 Score =  178 bits (451), Expect = 3e-49
 Identities = 135/424 (31%), Positives = 196/424 (46%), Gaps = 37/424 (8%)

Query: 1   MRLFHTSDWHLGQNLHGQERDFEHACFLTWLLARLADRKPDVLLIAGDIFDTVNPPVKAQ 60
           MR+ HTSDWHLGQN + + R+ EH  FL WLL      + D +++AGD+FDT +PP  A+
Sbjct: 1   MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR 60

Query: 61  ERLYDFIVNAHEQQPLLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVMWLDDGVLDA 120
                F+VN   QQ    +V++AGNHDS + +     +M  L T            V  A
Sbjct: 61  TLYNRFVVNL--QQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTV----------VASA 108

Query: 121 ERLLLPLPDANGDIKAWCLALPFLRPAEVTGPTLGDDYLRGIGRVHELLIAAAD------ 174
                 LP  +G   A    +PFLRP ++     G   L GI +   LL A  D      
Sbjct: 109 GHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAG---LNGIEKQQHLLAAITDYYQQHY 165

Query: 175 -----LKRQPGQALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSITYVALGHL 229
                L+      +IA  H    G S S D+ R + IG  +A PA  F P+  Y+ALGH+
Sbjct: 166 ADACKLRGDQPLPIIATGHLTTVGASKS-DAVRDIYIGTLDAFPAQNFPPA-DYIALGHI 223

Query: 230 HKPQRVNGEERIRYSGSPIPLSFSEISYQHQILEINCDGETLTSVEPLLIPRAVNLQRLG 289
           H+ Q + G E +RY GSPIPLSF E      +  +      L SVE L +P    +  L 
Sbjct: 224 HRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVL- 282

Query: 290 PAPLADLLVQLKALPDIDLLADPDRQPWLEVRVRLDEPQPDLRNQIENALQGKAVRLVRI 349
              LA +  QL+   D+      +   WL++ +  DE   D++ +I+   +   V ++ +
Sbjct: 283 KGDLASITAQLEQWRDV----SQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLV 338

Query: 350 GAEYAGKGSADGSEGDATLIELDQLTPQELFSRAWQDNFGSEVDEQTLTD-FATLLREVQ 408
                 +     S+   TL E   L+ +E+F+R        E  +Q L   F T L  + 
Sbjct: 339 RRSREQRERVLASQQRETLSE---LSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLA 395

Query: 409 QESE 412
            E E
Sbjct: 396 GEHE 399