Pairwise Alignments

Query, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas syringae pv. syringae B728a

Subject, 332 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase from Rhodanobacter sp. FW510-T8

 Score =  276 bits (705), Expect = 6e-79
 Identities = 145/297 (48%), Positives = 200/297 (67%), Gaps = 3/297 (1%)

Query: 10  GVQLVEVAPELAGQRIDNFLITYLKGVPKTLIYRILRKGEVRVNKGRIKPEYKLQAGDIV 69
           GV+ VE+ PE  GQRIDN L+T LKGVPK++IYR+LR G+VRVN  R KP+ +L  GD +
Sbjct: 12  GVRQVEIGPERDGQRIDNALVTLLKGVPKSMIYRLLRTGQVRVNGKRAKPDTRLVEGDTL 71

Query: 70  RIPPVRVPERDEPVPVAQALLQRLEAAIVYEDKALIVLNKPAGIAVHGGSGLSFGVIEAF 129
           RIPPVRV ER E        +  +  A+++EDK  +V++KPAG+A HGGSG+S G IE  
Sbjct: 72  RIPPVRVAERPEREGPPTGQVAEVADAVIFEDKHFLVIDKPAGVASHGGSGVSHGAIELL 131

Query: 130 RQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHEALRGDGVDKRYMALVRGNWATA 189
           R  RP  + LELVHRLDRDTSG+L+ A+ R+ L  L  A+R   V K+Y+ L+ G+ + A
Sbjct: 132 RAARPQ-EHLELVHRLDRDTSGVLVFARTRAGLTGLQAAIRAGEVTKQYLCLMLGHPSKA 190

Query: 190 LKQVRAPLMKSNLRSGERMVEVNEEGKEALTIFKVLRRFGDFATMVEAKPVTGRTHQIRV 249
              V APL+KS ++ GERMV V++ GK +LT F+ + ++   A +++A   TGRTHQIRV
Sbjct: 191 KFDVNAPLLKSVMQGGERMVRVSDNGKPSLTFFREMEQYPS-ARLMQATLGTGRTHQIRV 249

Query: 250 HTLHAGHAIAGDTKYGDENFSREIRDLGGKRLFLHAYMLTVPMPDGSKLNVQAPVDD 306
           H  H GH +AGD KYGD   ++  R++G  R+FLHA  ++  + DG   +  AP+ D
Sbjct: 250 HAAHIGHPLAGDPKYGDREMNKRYREMGLNRMFLHASHMSFDL-DGRSYSFSAPLPD 305