Pairwise Alignments

Query, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas syringae pv. syringae B728a

Subject, 318 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Dickeya dadantii 3937

 Score =  351 bits (900), Expect = e-101
 Identities = 188/301 (62%), Positives = 224/301 (74%), Gaps = 7/301 (2%)

Query: 9   PGVQLVEVAPELAGQRIDNFLITYLKGVPKTLIYRILRKGEVRVNKGRIKPEYKLQAGDI 68
           P VQ + V+ E AGQRIDNFL T LKGVPK++IYRILRKGEVRVNK RIKPEYKL  GD 
Sbjct: 6   PTVQFLTVSSEEAGQRIDNFLRTRLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLLDGDE 65

Query: 69  VRIPPVRVPERDEPVPVAQALLQRLEA---AIVYEDKALIVLNKPAGIAVHGGSGLSFGV 125
           VRIPPVR  ER+EP     A L ++ A    I+YED  L++LNKP+G AVHGGSGLSFGV
Sbjct: 66  VRIPPVRQSEREEPA--VSASLDKVSALVDCILYEDDYLLLLNKPSGTAVHGGSGLSFGV 123

Query: 126 IEAFRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHEALRGDGVDKRYMALVRGN 185
           IE  R LRP+A+ LELVHRLDRDTSG+L++AKKRS LR LHE LRG G+ K Y+ALVRG 
Sbjct: 124 IEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLRGKGMQKDYLALVRGQ 183

Query: 186 WATALKQVRAPLMKSNLRSGERMVEVNEEGKEALTIFKVLRRFGDFATMVEAKPVTGRTH 245
           W +  K V+APL+K+ L+SGER+V VN EGK + T+FKV  RF D AT+V A P+TGRTH
Sbjct: 184 WQSHCKAVQAPLLKNVLQSGERIVRVNSEGKPSETLFKVEERF-DCATLVRASPITGRTH 242

Query: 246 QIRVHTLHAGHAIAGDTKYGDENFSREIRDLGGKRLFLHAYMLTVPMP-DGSKLNVQAPV 304
           QIRVHT +AGH IA D +YGD  F  ++   G KRLFLHA  L    P  G  + ++AP+
Sbjct: 243 QIRVHTQYAGHPIAFDDRYGDREFDAQLAGTGLKRLFLHALALRFEHPHTGETMRIEAPL 302

Query: 305 D 305
           D
Sbjct: 303 D 303