Pairwise Alignments

Query, 448 a.a., replicative DNA helicase (phage and plasmid) from Pseudomonas syringae pv. syringae B728a

Subject, 464 a.a., replicative DNA helicase from Pseudomonas sp. S08-1

 Score =  481 bits (1239), Expect = e-140
 Identities = 245/439 (55%), Positives = 333/439 (75%), Gaps = 10/439 (2%)

Query: 8   PPHSVEAEQAVLGGLMLDNDSWDLIADRIKADDFYRAEHRLIFQSIAGLAESNRPFDVVT 67
           PPHS+EAEQAVLGGLMLDN++W+ ++D +   DFYR +HRLIF+++  LAE N PFDVVT
Sbjct: 20  PPHSIEAEQAVLGGLMLDNNAWERVSDAVSDGDFYRHDHRLIFRAVVTLAERNSPFDVVT 79

Query: 68  VSDSITA---IDAAGGLAYLSELAKNTPSVANIKAYAETVSNRAHLRRIISHGYACTREA 124
           +S+ +     +   GGLAYL ELAKNTPSVANIKAYA+ +  RA LR++I         A
Sbjct: 80  LSEQLDKEGHLSQVGGLAYLGELAKNTPSVANIKAYAQIIRERATLRQLIGISNDIADMA 139

Query: 125 SDPQA-NASEVQDVIEQQLFALGQGR-QTSDFVDVNQMLMQVVDKIDLRFNAGESVVGLP 182
             PQ  +A EV D  E+Q+F + + R +    V +N++L++ +D+ID  FN  E + G+ 
Sbjct: 140 YAPQGKSAVEVLDEAERQIFQIAEARPKAGGPVGINEILVKTIDRIDELFNTNEGLTGIS 199

Query: 183 TGLSDLDELTGGLQPADLIIIAARPSMGKTSLALNLVDAALQKDTQATVQVYSLEMPAEA 242
           TG +DLD +T GLQPADL+I+A RPSMGKT+ A+NLV+ A+ + T   V V+SLEMP+++
Sbjct: 200 TGFTDLDGMTSGLQPADLVIVAGRPSMGKTTFAMNLVENAVLR-TDKVVLVFSLEMPSDS 258

Query: 243 IIYRLISILGHLNLEKLIRGQLEDEDWPKLAMAVQKINSYGDRLVIDDQADLTPSAIRAR 302
           I+ R++S LG ++  K+  G+L+D+DWP+L  AV  +N    +L IDD A ++P+ +RAR
Sbjct: 259 IVMRMLSSLGRIDQTKVRSGKLDDDDWPRLTSAVNLLNER--KLFIDDTAGISPTEMRAR 316

Query: 303 ARRGARRFGKPVLILIDYLQMMKCPGK--ENRTNEISEISRSLKALAKEFDCPVVALSQL 360
           ARR AR  G+  +I++DYLQ+M+ PG   +NRTNEISEISRSLKALAKEF+CPV+ALSQL
Sbjct: 317 ARRLAREHGEIAMIMVDYLQLMRIPGSSGDNRTNEISEISRSLKALAKEFNCPVIALSQL 376

Query: 361 NRELERRPNKRPINADLRESGALEQDADLILFVYRDEVYNPDSEQKGVAELILSKHRNGA 420
           NR LE+RPNKRP+N+DLRESGA+EQDAD+I+FVYRDEVY+P++E KGVAE+I+ K RNG 
Sbjct: 377 NRSLEQRPNKRPVNSDLRESGAIEQDADIIMFVYRDEVYHPETEYKGVAEIIIGKQRNGP 436

Query: 421 LGTVRTAFIPQHTRFENLS 439
           +GT R AFI ++TRF+NL+
Sbjct: 437 IGTCRLAFIGKYTRFDNLA 455