Pairwise Alignments

Query, 448 a.a., replicative DNA helicase (phage and plasmid) from Pseudomonas syringae pv. syringae B728a

Subject, 481 a.a., Replicative DNA helicase (EC 3.6.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  384 bits (987), Expect = e-111
 Identities = 204/448 (45%), Positives = 296/448 (66%), Gaps = 13/448 (2%)

Query: 8   PPHSVEAEQAVLGGLMLDNDSWDLIADRIKADDFYRAEHRLIFQSIAGLAESNRPFDVVT 67
           PPHS+EAE +VLGGL+LDN +WD +AD I   DFYR EHRL + +IA L  +++P DVVT
Sbjct: 33  PPHSIEAESSVLGGLLLDNGAWDRVADLINDSDFYRYEHRLAYSAIATLVNASKPADVVT 92

Query: 68  VSDSITAI---DAAGGLAYLSELAKNTPSVANIKAYAETVSNRAHLRRIISHGYACTREA 124
           V + + +    + AGGL YL+ LA+  PS ANI+ YAE V  RA LR++++        A
Sbjct: 93  VFEHLQSFGKAEEAGGLGYLNSLAQYVPSAANIRRYAEIVRERAILRKLVAASDEIATAA 152

Query: 125 SDPQAN-ASEVQDVIEQQLFALGQ--GRQTSDFVDVNQMLMQVVDKIDLRFNAGESVVGL 181
            +PQ    +++ D  EQ++F +G+   R    F  ++++++ ++D++    +    V G+
Sbjct: 153 FNPQGRPVAKILDEAEQKVFKIGEEGSRMKEGFQSMDKLVVDLLDRVQEMADNPADVTGV 212

Query: 182 PTGLSDLDELTGGLQPADLIIIAARPSMGKTSLALNLVDAALQKDTQATVQVYSLEMPAE 241
           PTG  DLD +T GLQ  DL+++AARPSMGKT+ A+N+ +     +    V V+S+EM A 
Sbjct: 213 PTGFIDLDRMTSGLQAGDLVVLAARPSMGKTAFAINIAEHVALNEG-LPVAVFSMEMGAS 271

Query: 242 AIIYRLISILGHLNLEKLIRGQLEDEDWPKLAMAVQKINSYGDRLVIDDQADLTPSAIRA 301
            +  R++  +G +N   L  G+L D++WP+L  A++K+ +    L ID+   LTPS +RA
Sbjct: 272 QLAVRVVGSIGRINQGHLRTGKLTDDEWPRLTEAIEKLRTVS--LHIDETPGLTPSELRA 329

Query: 302 RARRGARRFGKPVLILIDYLQMMK---CPGKENRTNEISEISRSLKALAKEFDCPVVALS 358
            ARR AR+ GK  LI++DYLQ+M      G +NR  E+ EISR LK LAKE  CPV+ALS
Sbjct: 330 NARRLARQCGKLGLIVVDYLQLMSGSSAAGGDNRATELGEISRGLKMLAKELQCPVIALS 389

Query: 359 QLNRELERRPNKRPINADLRESGALEQDADLILFVYRDEVYNPDS-EQKGVAELILSKHR 417
           QLNR +E+R +KRP+ +DLRESGA+EQDAD+I+F+YRDE Y  D+ ++ GVAE+I+ K R
Sbjct: 390 QLNRSVEQRTDKRPMMSDLRESGAIEQDADIIMFIYRDEYYTRDACKEPGVAEIIIGKQR 449

Query: 418 NGALGTVRTAFIPQHTRFENLSAAAWQG 445
           NG  GTV+ AF+   TRFE+L+     G
Sbjct: 450 NGPTGTVKLAFLNMLTRFESLAGGGMGG 477