Pairwise Alignments

Query, 448 a.a., replicative DNA helicase (phage and plasmid) from Pseudomonas syringae pv. syringae B728a

Subject, 460 a.a., Replicative DNA helicase from Methylophilus sp. DMC18

 Score =  402 bits (1034), Expect = e-117
 Identities = 215/447 (48%), Positives = 306/447 (68%), Gaps = 14/447 (3%)

Query: 8   PPHSVEAEQAVLGGLMLDNDSWDLIADRIKADDFYRAEHRLIFQSIAGLAESNRPFDVVT 67
           PPHS+EAEQ+VLGGL+LDN++ D IAD +   DFY+ +H+LI++ IA L E N+P D+VT
Sbjct: 12  PPHSIEAEQSVLGGLLLDNEALDKIADILAPQDFYQHDHKLIYEHIARLIERNQPADIVT 71

Query: 68  VSDSIT---AIDAAGGLAYLSELAKNTPSVANIKAYAETVSNRAHLRRIISHGYACTREA 124
           V++S+     +   GG+AYL  LA+NTP+ ANI+ YAE V  R  +R++++ G      A
Sbjct: 72  VAESLENSGELTTVGGVAYLGALAQNTPTAANIRRYAEIVHERFVMRQLVAVGTDIAESA 131

Query: 125 SDPQA-NASEVQDVIEQQLFALGQG--RQTSDFVDVNQMLMQVVDKIDLRFNAGE--SVV 179
             P   +A ++ D  E ++F + +G  R++  F+ +  +L QV D+ID  ++      V 
Sbjct: 132 YQPNGRDAQQLLDEAEAKIFQIAEGGNRKSQGFLGMQVLLPQVADRIDYLYSRENHSDVT 191

Query: 180 GLPTGLSDLDELTGGLQPADLIIIAARPSMGKTSLALNLVDAALQKDTQATVQVYSLEMP 239
           G+PTG +DLD +T GLQ  D++IIA RPSMGKT+ A+N+ +  +  +T   V ++S+EM 
Sbjct: 192 GIPTGFTDLDSMTSGLQGGDMVIIAGRPSMGKTAFAINIAEN-VALETNKAVAIFSMEMG 250

Query: 240 AEAIIYRLISILGHLNLEKLIRGQLEDEDWPKLAMAVQKINSYGDRLVIDDQADLTPSAI 299
           A  +  R+I  +G L+  K+  G LEDEDW KL  A+ K+N     + ID+ A L+   +
Sbjct: 251 ATQLTTRMIGSIGRLDQHKMRNGNLEDEDWEKLTTALGKLNEAP--IYIDEGAGLSSFDV 308

Query: 300 RARARRGARRFGKPVLILIDYLQMMKCPGK---ENRTNEISEISRSLKALAKEFDCPVVA 356
           RARARR  R+ G+  LI+IDYLQ+M  P     ENR  EISEISRSLKALAKE + P++A
Sbjct: 309 RARARRLHRQTGELGLIVIDYLQLMSSPAGRQGENRATEISEISRSLKALAKELNVPLIA 368

Query: 357 LSQLNRELERRPNKRPINADLRESGALEQDADLILFVYRDEVYNPDSEQKGVAELILSKH 416
           +SQLNR +++RP+KRP+ +DLRESGA+EQDADLI+FVYRDE YNPDS +KG AE+I++K 
Sbjct: 369 ISQLNRSVDQRPDKRPVMSDLRESGAIEQDADLIMFVYRDEYYNPDSAEKGTAEIIIAKQ 428

Query: 417 RNGALGTVRTAFIPQHTRFENLSAAAW 443
           RNG +G VR  F+  HTRF + + AA+
Sbjct: 429 RNGPIGRVRLTFMGAHTRFADYANAAY 455