Pairwise Alignments

Query, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 540 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  364 bits (934), Expect = e-105
 Identities = 215/540 (39%), Positives = 326/540 (60%), Gaps = 6/540 (1%)

Query: 6   INLAPRATLFFSAIILLVVVLGVIAILQMGKLRDTEKDVELNWLPSIRQTAM-MNSTVLR 64
           + ++ +  L F    L+ + +G++ I  + +L    +    N L S+  TA  +N  V  
Sbjct: 1   MKISTKLLLSFLLCALVTLAVGLLGIKGVVRLSTALELTFSNNLVSVSNTAATLNGLVAH 60

Query: 65  VR-----LETQRAVADPQTVQQTIVKFPAYRKAMKDAVYNYETLIASDQERQLFLAVKKS 119
            R     ++  +    PQ   +         K  + +   Y      D ER     + + 
Sbjct: 61  NRGLYRLMDASKGDVSPQDRDRVRQDIAQELKRSQASYATYRATPLEDDERAAGDKLDQI 120

Query: 120 YDDYASQLDLLEPLLKAGDTASIVKLVATGIRPLTNQMETQVEELTQFNNKGAALAGVQA 179
           +  Y S  + +  LL  G        + T    L  Q    +  + + NN+      V A
Sbjct: 121 WPTYISSSERIMALLDGGQVDQARAQLNTSNNELFRQARELIRVMIESNNRQIKEGAVAA 180

Query: 180 TQVYDSGLYIVIGLIIFVALLTLCLATLLTKTITSPIGSALSVAERIASSDLTKEVEVSG 239
            ++ +S L  +I  I+   L+ + +  L+T+ IT PI  A+  A+RIA  DLT+ +    
Sbjct: 181 DELRNSALTWMISGIVLAFLIAIIIGVLITRLITRPIAQAVQSAQRIAQGDLTQAIITER 240

Query: 240 TDEAGRLLSALATMQQNLRSTIMQIADSSSQLAAASEEMTAVTEQSSLGLVSQNDEVNQA 299
           TDEAG+LL AL+ MQ  L+ST+++IA++S QLA+A+EE++AVT++SS GL  QNDE+ QA
Sbjct: 241 TDEAGQLLMALSDMQGGLKSTLVEIANASDQLASAAEELSAVTDESSRGLTRQNDEIQQA 300

Query: 300 ATAVTEMSAAVDEVARNAESASEESRKGQGYTEVGLERVSQTLKSIEKLSSNVRDTSEQI 359
           ATAV +M+AAVDEVA NA S SE SR+     E G ++V Q +  +  +   + D+++ +
Sbjct: 301 ATAVNQMTAAVDEVASNAVSTSEASRQATTEAEDGRQQVEQAVSGMSSMVVEINDSTQSV 360

Query: 360 TGLSNRAQNISKVVEVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQ 419
             L+ + + I KV++VIR IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQ
Sbjct: 361 ADLAGQVREIGKVIDVIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQ 420

Query: 420 VSTQEIEQMIQAIQNDSDQAVKAMATSRELAAESLSVAGDASSSLDQIATAITGINERNI 479
           +ST +IE+MI  +Q  +D AV AM  S   A  + ++A +A  +L +I  ++  INERN+
Sbjct: 421 ISTVDIEKMIGDVQTGADDAVAAMNKSLTWANNTQTLAQNAGEALQRITASVAKINERNL 480

Query: 480 LIATASEEQAHVAREVDRNLVSIRELASQSSAGASQTASACNEMSKLAVSLNQLVNRFKV 539
           +IA+ASEEQA VAREVDRNL++I++L++Q++AGA QT ++  ++S+LA S N LV++F++
Sbjct: 481 VIASASEEQAQVAREVDRNLLNIQDLSTQTAAGAHQTNASSQDLSRLATSFNVLVSKFQL 540