Pairwise Alignments

Query, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 550 a.a., aromatic acid chemoreceptor from Pseudomonas putida KT2440

 Score =  284 bits (726), Expect = 7e-81
 Identities = 165/345 (47%), Positives = 227/345 (65%), Gaps = 1/345 (0%)

Query: 195 IFVALLTLCLATLLTKTITSPIGSALSVAERIASSDLTKEVEVSGTDEAGRLLSALATMQ 254
           + V L  LC A  + + +  P+  A     RIAS DL+  V+  G +E G+L   L  MQ
Sbjct: 207 VTVVLAVLCWA-FIAQRVLHPLREAGGHFRRIASGDLSVPVQGQGNNEIGQLFHELQRMQ 265

Query: 255 QNLRSTIMQIADSSSQLAAASEEMTAVTEQSSLGLVSQNDEVNQAATAVTEMSAAVDEVA 314
           Q+ R T+ QI + + QL AA+  + AVTE+S+  L  Q  E+ QAATAVTEM+ AV+EVA
Sbjct: 266 QSQRDTLGQINNCARQLDAAATALNAVTEESANNLRQQGQELEQAATAVTEMTTAVEEVA 325

Query: 315 RNAESASEESRKGQGYTEVGLERVSQTLKSIEKLSSNVRDTSEQITGLSNRAQNISKVVE 374
           RNA + S+ + +          +VS+ +   E ++  ++ +S  +  L  + ++I KV+E
Sbjct: 326 RNAITTSQTTSESNQLAAQSRRQVSENIDGTEAMTREIQTSSAHLQQLVGQVRDIGKVLE 385

Query: 375 VIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQVSTQEIEQMIQAIQN 434
           VIR+++EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RTQ STQEIEQMI ++Q 
Sbjct: 386 VIRSVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVRTLAYRTQQSTQEIEQMIGSVQA 445

Query: 435 DSDQAVKAMATSRELAAESLSVAGDASSSLDQIATAITGINERNILIATASEEQAHVARE 494
            ++ AV +M  S   A  +L V   +   L+ I +AI  INERN++IA+A+EEQA VARE
Sbjct: 446 GTEAAVASMQASTNRAQSTLDVTLASGQVLEGIYSAIGEINERNLVIASAAEEQAQVARE 505

Query: 495 VDRNLVSIRELASQSSAGASQTASACNEMSKLAVSLNQLVNRFKV 539
           VDRNL++IREL++ S+AGA QT+ A   +S L   +  LV RFKV
Sbjct: 506 VDRNLLNIRELSNHSAAGAQQTSEASKALSGLVGEMTALVGRFKV 550