Pairwise Alignments

Query, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 517 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Pseudomonas sp. S08-1

 Score =  333 bits (853), Expect = 1e-95
 Identities = 193/433 (44%), Positives = 277/433 (63%)

Query: 107 DQERQLFLAVKKSYDDYASQLDLLEPLLKAGDTASIVKLVATGIRPLTNQMETQVEELTQ 166
           D E++L   ++         +  L+ +L+A D  ++    A  + P  + +  Q  +L +
Sbjct: 85  DDEKRLIEQIQPLMQQAHEPIQRLKAILRANDGEALAAFTAQELYPHIDPLSEQFGKLIE 144

Query: 167 FNNKGAALAGVQATQVYDSGLYIVIGLIIFVALLTLCLATLLTKTITSPIGSALSVAERI 226
              + +     +   +Y     +V GL+  + +     A  +++ I   +     V  R 
Sbjct: 145 VQLQESERQYERGLALYQRNFNLVAGLLALLLIGGGIQAWTMSRGINLRLTELREVVARN 204

Query: 227 ASSDLTKEVEVSGTDEAGRLLSALATMQQNLRSTIMQIADSSSQLAAASEEMTAVTEQSS 286
           A+ DL++ V+ SG DE   + ++   MQ+NLR T+  I  +++QLA+A+E++ AVTEQS+
Sbjct: 205 AAGDLSQPVQCSGGDEITEVQTSFKLMQENLRDTLQGIQGAATQLASAAEQLHAVTEQSA 264

Query: 287 LGLVSQNDEVNQAATAVTEMSAAVDEVARNAESASEESRKGQGYTEVGLERVSQTLKSIE 346
            G+  QNDE+  AATAVTEMSAAVDEVARNA   S+ SR+ Q   E G  +VS T  +IE
Sbjct: 265 QGINRQNDEIQMAATAVTEMSAAVDEVARNANHTSDSSREAQETAEAGRRQVSTTRSTIE 324

Query: 347 KLSSNVRDTSEQITGLSNRAQNISKVVEVIRAIAEQTNLLALNAAIEAARAGEQGRGFAV 406
           +LS  ++ TS  I  L++ A  I +V+EVIR IAEQTNLLALNAAIEAARAG+QGRGFAV
Sbjct: 325 QLSDRLQITSGTIARLADEAIAIGRVLEVIRTIAEQTNLLALNAAIEAARAGDQGRGFAV 384

Query: 407 VADEVRALAHRTQVSTQEIEQMIQAIQNDSDQAVKAMATSRELAAESLSVAGDASSSLDQ 466
           VADEVRALA RTQ STQEIE+MI AIQ+ S ++V AM  S E A+ S  +A  A  +L  
Sbjct: 385 VADEVRALAQRTQSSTQEIERMISAIQSASQESVDAMGASSEYASRSSEMASQADGALAL 444

Query: 467 IATAITGINERNILIATASEEQAHVAREVDRNLVSIRELASQSSAGASQTASACNEMSKL 526
           IA  +  INE N++IA+A+EEQA VAREVDRNLV+IR++A Q+S GA +T+ A +++++L
Sbjct: 445 IAERVGQINEMNLVIASAAEEQAQVAREVDRNLVAIRDIAEQNSTGAQETSVASDQLARL 504

Query: 527 AVSLNQLVNRFKV 539
           A  LN +V RF++
Sbjct: 505 ASELNGMVQRFRL 517