Pairwise Alignments

Query, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 541 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  442 bits (1137), Expect = e-128
 Identities = 259/542 (47%), Positives = 367/542 (67%), Gaps = 4/542 (0%)

Query: 1   MRLRNINLAPRATLFFSAIILLVVVLGVIAILQMGKLRDTEKDVELNWLPSIRQTAMMNS 60
           M LR +N+APRA L F+ I LLV++LGV A+ +M ++R +  D+    LPS+     +  
Sbjct: 1   MSLRQLNIAPRAFLGFAFIALLVILLGVFAVNRMTQIRQSSVDMSATQLPSVTFLGNITE 60

Query: 61  TVLRVRLETQRAVA--DPQTVQQTIVKFPAYRKAMKDAVYNYETLIASDQERQLFLAVKK 118
            VLR+R+ + R +   +P  +Q+   +       +K A   Y  L    +E  L+     
Sbjct: 61  NVLRLRILSFRVLVNREPAGLQEAETRIGVLADKVKTAQAGYAALPMGTEEAALYKTFVT 120

Query: 119 SYDDYA-SQLDLLEPLLKAGDTASIVKLVATGIRPLTNQMETQVEELTQFNNKGAALAGV 177
           + D+Y  +Q D+L  L K G    +  L+ T I+  T+QM  Q+ +L   N   A  A  
Sbjct: 121 TLDNYLKAQADMLV-LSKQGKVDEMRALINTRIKDGTDQMGEQLNKLIALNAADAKQADA 179

Query: 178 QATQVYDSGLYIVIGLIIFVALLTLCLATLLTKTITSPIGSALSVAERIASSDLTKEVEV 237
           +A Q Y   +  VI + +  ALLT+ LA LLT++I +P+  A+ VAE IA  +L+K +E 
Sbjct: 180 EAGQSYQGAITGVIVVSVAAALLTVLLAWLLTRSIVTPLRKAVEVAETIAGGNLSKIIED 239

Query: 238 SGTDEAGRLLSALATMQQNLRSTIMQIADSSSQLAAASEEMTAVTEQSSLGLVSQNDEVN 297
            G DE  RLLSAL+TMQ NLR TI  IA S++QLA+A+EE++AVTE++S GL  QN+E++
Sbjct: 240 DGKDEPARLLSALSTMQANLRQTIQHIAGSATQLASAAEELSAVTEEASKGLQQQNNEID 299

Query: 298 QAATAVTEMSAAVDEVARNAESASEESRKGQGYTEVGLERVSQTLKSIEKLSSNVRDTSE 357
           QAATAV EM+AAV+EVARNA S SE S +       G +RV +T+ +I+ ++ +V++T+ 
Sbjct: 300 QAATAVNEMTAAVEEVARNAVSTSEASGQSNQAAREGRDRVMETVGAIQTMTLDVQNTAA 359

Query: 358 QITGLSNRAQNISKVVEVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHR 417
            I GL+ + ++I KV++VIRAIAEQTNLLALNAAIEAARAGE GRGFAVVADEVRALAHR
Sbjct: 360 MIEGLATQGRDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHR 419

Query: 418 TQVSTQEIEQMIQAIQNDSDQAVKAMATSRELAAESLSVAGDASSSLDQIATAITGINER 477
           T  STQEIE+M+  IQN + +AV++M  S +    +L +A  A  +L+QI  +I+ INER
Sbjct: 420 TAQSTQEIEKMVAGIQNGTGEAVQSMQQSNQRTQGTLEMARAAGVALEQITQSISLINER 479

Query: 478 NILIATASEEQAHVAREVDRNLVSIRELASQSSAGASQTASACNEMSKLAVSLNQLVNRF 537
           N++IA+ASEEQA V+REVDRNLV+IR+LA+QS+AGA+QT++A +E+S+LAV LN +V RF
Sbjct: 480 NLVIASASEEQAQVSREVDRNLVNIRDLATQSAAGANQTSAASHELSRLAVDLNGMVARF 539

Query: 538 KV 539
            +
Sbjct: 540 VI 541