Pairwise Alignments

Query, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 542 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  414 bits (1064), Expect = e-120
 Identities = 238/543 (43%), Positives = 359/543 (66%), Gaps = 5/543 (0%)

Query: 1   MRLRNINLAPRATLFFSAIILLVVVLGVIAILQMGKLRDTEKDVELNWLPSIRQTAMMNS 60
           M  +N+ ++ +ATL F +I  +++ LGV A +Q+  LR   + +  N LPS +    +  
Sbjct: 1   MNFKNLGISTKATLCFGSITAILIFLGVFAYVQLSHLRAAGQQLAENALPSTQTIDDIQI 60

Query: 61  TVLRVRLETQRAVADPQTVQQTIVKFPAYRKAMK----DAVYNYETLIASDQERQLFLAV 116
           ++L  RLE+ R +A+   V          + +++     + Y  + L+A +++R+ F A 
Sbjct: 61  SLLNARLESIRMLANSTNVAGKSAAEAKVQHSVQILEERSDYYRKNLMAGEKDREQFEAA 120

Query: 117 KKSYDDYASQLDLLEPLLKAGDTASIVKLVATGIRPLTNQMETQVEELTQFNNKGAALAG 176
            ++   Y + L  L  L  +    +++   +T     ++  E ++  + QFN + A   G
Sbjct: 121 DQAMKIYIAGLAQLSKLDLSEHEQALIFANSTQADNASSFQE-KLNVIRQFNAEQAKALG 179

Query: 177 VQATQVYDSGLYIVIGLIIFVALLTLCLATLLTKTITSPIGSALSVAERIASSDLTKEVE 236
           V+A  VY+  + +++ +++   LLT+ LA  LT++I  P+G +L +AE IAS DLT+ +E
Sbjct: 180 VEADVVYNESVNVLVTIVVVSLLLTIVLAIALTRSIVKPVGDSLRLAEEIASGDLTRRLE 239

Query: 237 VSGTDEAGRLLSALATMQQNLRSTIMQIADSSSQLAAASEEMTAVTEQSSLGLVSQNDEV 296
           ++GTDE  RL+ AL  M +NL+ T+++I+++S QL++A+ EMT++TE +   L  QN E+
Sbjct: 240 ITGTDEVSRLMVALNLMSKNLQDTVLEISEASIQLSSAAVEMTSITEAADRHLQQQNSEI 299

Query: 297 NQAATAVTEMSAAVDEVARNAESASEESRKGQGYTEVGLERVSQTLKSIEKLSSNVRDTS 356
            QAATAVTEM++AV+EVARNA S S+ +++     ++G  RVS+TL ++E L+  V  ++
Sbjct: 300 EQAATAVTEMTSAVEEVARNATSTSQAAQESSEAAKLGNLRVSETLSAVETLTELVESSA 359

Query: 357 EQITGLSNRAQNISKVVEVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAH 416
            Q+T L+ +A++IS+VV VIR+IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAH
Sbjct: 360 SQVTELAGQAEDISQVVGVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAH 419

Query: 417 RTQVSTQEIEQMIQAIQNDSDQAVKAMATSRELAAESLSVAGDASSSLDQIATAITGINE 476
           RTQ+ST EIE+MI AIQ+ S   V+++  S E    +   A  A  SL QI  ++  INE
Sbjct: 420 RTQISTLEIEKMITAIQSGSSTTVESIRRSTEEVYNTKRTAEGAGQSLRQITDSVLQINE 479

Query: 477 RNILIATASEEQAHVAREVDRNLVSIRELASQSSAGASQTASACNEMSKLAVSLNQLVNR 536
           RN+ IA ASE+QAHVAR+VDR+L+SIR LA QSS GA+QT  A NE+S+LAV+LN LV +
Sbjct: 480 RNLQIAVASEQQAHVARDVDRSLLSIRSLAIQSSEGANQTIKASNELSRLAVNLNHLVQK 539

Query: 537 FKV 539
           FKV
Sbjct: 540 FKV 542