Pairwise Alignments

Query, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 541 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  455 bits (1171), Expect = e-132
 Identities = 259/541 (47%), Positives = 362/541 (66%), Gaps = 2/541 (0%)

Query: 1   MRLRNINLAPRATLFFSAIILLVVVLGVIAILQMGKLRDTEKDVELNWLPSIRQTAMMNS 60
           M LRN+N+APRA L F+ I  L+++LG+ A+ QM K+R   +D+ L+ +PSIR       
Sbjct: 1   MSLRNMNIAPRAFLGFAFIGALMLLLGIFALNQMSKIRGATQDITLSSVPSIRALDDFTQ 60

Query: 61  TVLRVRLETQRAVA--DPQTVQQTIVKFPAYRKAMKDAVYNYETLIASDQERQLFLAVKK 118
             LR+R+ + R +   +P   Q+T+  F    + ++ A   YE LI S +ER ++    +
Sbjct: 61  LTLRLRVLSYRLLTNREPDVQQKTLEAFELRNQQIRAAQGTYEKLIDSSEERSIYDEYTR 120

Query: 119 SYDDYASQLDLLEPLLKAGDTASIVKLVATGIRPLTNQMETQVEELTQFNNKGAALAGVQ 178
               Y      ++ L +A     +  L+ T +   + Q+ T +  L  +NNK A     Q
Sbjct: 121 LLAQYQQIEARMKSLSRANQVEELRTLLNTELLSNSEQVNTVLNRLLDYNNKAALATNQQ 180

Query: 179 ATQVYDSGLYIVIGLIIFVALLTLCLATLLTKTITSPIGSALSVAERIASSDLTKEVEVS 238
           A   Y+     VIGL+I    LT+  A LLT++IT PI  AL  AE +A  +LT+ ++V 
Sbjct: 181 AEDQYNMAFDWVIGLLIIATALTMLFAWLLTRSITLPISLALEAAEEVAEGNLTRPIKVD 240

Query: 239 GTDEAGRLLSALATMQQNLRSTIMQIADSSSQLAAASEEMTAVTEQSSLGLVSQNDEVNQ 298
           G DEAGRLL+A+A MQ  LR T+ +IA S+SQLA+A+EE+ AVT++S+ GL  QN+E+ Q
Sbjct: 241 GNDEAGRLLAAMAKMQDKLRDTLQRIAGSASQLASAAEELNAVTDESARGLTQQNNEIEQ 300

Query: 299 AATAVTEMSAAVDEVARNAESASEESRKGQGYTEVGLERVSQTLKSIEKLSSNVRDTSEQ 358
           AATAV EM++AV+EVARNA S SE SR        G + V +T+ +IE++S +V+ T+  
Sbjct: 301 AATAVNEMTSAVEEVARNAVSTSEASRNATTSAGDGRDLVQETVSAIERMSGDVQATATL 360

Query: 359 ITGLSNRAQNISKVVEVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRT 418
           I  L+N +++I KV++VIR +A+QTNLLALNAAIEAARAGE GRGFAVVADEVRALAHRT
Sbjct: 361 IGDLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT 420

Query: 419 QVSTQEIEQMIQAIQNDSDQAVKAMATSRELAAESLSVAGDASSSLDQIATAITGINERN 478
           Q ST EIE+MI +IQ  ++ AV +M  S E A  +L++A  A  SLD I TAI  INERN
Sbjct: 421 QQSTSEIERMIGSIQAGTEHAVDSMRNSTERAESTLNIAKGAGMSLDTINTAIVEINERN 480

Query: 479 ILIATASEEQAHVAREVDRNLVSIRELASQSSAGASQTASACNEMSKLAVSLNQLVNRFK 538
           ++IA+A+EEQA VAREVDRNLV+IR+L+ QS+ GASQT++A +E+S+LAV LN LV RF+
Sbjct: 481 LVIASAAEEQAQVAREVDRNLVNIRDLSVQSATGASQTSAASSELSRLAVDLNGLVGRFQ 540

Query: 539 V 539
           +
Sbjct: 541 L 541