Pairwise Alignments

Query, 288 a.a., Peptidoglycan-binding LysM:Peptidase M23B from Pseudomonas syringae pv. syringae B728a

Subject, 289 a.a., Murein hydrolase activator NlpD precursor from Alteromonas macleodii MIT1002

 Score =  191 bits (485), Expect = 2e-53
 Identities = 120/285 (42%), Positives = 167/285 (58%), Gaps = 20/285 (7%)

Query: 18  LVIGIALSV-LLVGCSSSPSGGVRVVDRNGNAVAQRPTVTTGQYVVRRGDTLFSIAFRYG 76
           L IGI L + +L+G  +  S    VV  N          T   Y V+RGDTL+++A+  G
Sbjct: 6   LHIGILLYICVLIGGCAGRSAPAPVVLLNSQVSDGSEEYTKKTYKVQRGDTLYAVAWYTG 65

Query: 77  WDWKALAARNQIPEPFTIKPGQTIRFDGRSSSTPNVVSTSGAGRPVTSTSTSTGSSGSVK 136
            D++ LA  NQ+  P+TI PGQ +     S    NV +     +  T+ ST+  +S   K
Sbjct: 66  NDYRDLAKYNQLSAPYTIFPGQVLNVTPPS----NVATAPVIPKSKTNQSTAPTTSNVDK 121

Query: 137 TTV-MSKPVAV---VPVVIPPSATTGTGPAG----KSPTG-------WTWPSSGILIGKF 181
           + V   +P A      VV P + TT   P+     ++PT        W WP+ G ++G F
Sbjct: 122 SLVDRPQPQAYRESEKVVKPQNVTTVKKPSQSVKKQTPTSFPDKVQEWVWPAEGKVVGTF 181

Query: 182 SSNGSLNKGIDIAGDLGQPVLAASDGSVVYAGSGLRGYGELIIIKHSDTYVSAYGHNRRL 241
           S + S NKGIDIAG  G  V+AA+DG VVY+GS LRGYG L+IIKH+DT++SAY +N  +
Sbjct: 182 SKSESGNKGIDIAGVKGSKVVAAADGKVVYSGSALRGYGNLVIIKHTDTFLSAYAYNDTI 241

Query: 242 LVREGQQVKAGQTIAEMGSTGTDRVKLHFEIRRQGKPVDPLGFLP 286
           LV+E + V AGQ IA MG +GT+ VKLHFE+R +GK +DP+ +LP
Sbjct: 242 LVKEREWVSAGQQIATMGDSGTNSVKLHFEVRYRGKSLDPMKYLP 286