Pairwise Alignments

Query, 269 a.a., Protein of unknown function DUF548 from Pseudomonas syringae pv. syringae B728a

Subject, 252 a.a., rRNA small subunit methyltransferase J from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  215 bits (548), Expect = 7e-61
 Identities = 119/228 (52%), Positives = 157/228 (68%), Gaps = 3/228 (1%)

Query: 27  AQRLGLPLTDAHADFALQLTDEGLQLQQLGDDAPGAVRVDFVEGAVAHRRLFGGGTGQMI 86
           A R GL   D     AL +T + L+L++  +   G + VDFV GA+AHRR FGGG G+ +
Sbjct: 20  AARWGLE-HDEDNPMALVMTPQHLELRKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAV 78

Query: 87  AKAVGIQPGIRPSVLDATAGLGKDAFVLASLGCDMSLIERQPIIAALLEDGLARGRGDRD 146
           AKAVGI+    P V+DATAGLG+DAFVLAS+GC + ++ER P++AALL+DGL RG  D D
Sbjct: 79  AKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLTRGYADAD 138

Query: 147 VGS-IIARMRLLTGNSIDLIRAWTGEPPQVIYLDPMFPHREKTALVKKEMRLFRPLVGDD 205
           +G  +  R++L+  +S+  +   T   PQV+YLDPMFPHR+K+ALVKKEMR+F+ LVG D
Sbjct: 139 IGGWLQERLQLIHASSLTALTDITPR-PQVVYLDPMFPHRQKSALVKKEMRVFQSLVGPD 197

Query: 206 MDAPALLEAALALATHRVVVKRPRKAPCIDGLKPGYALDGKSSRYDIY 253
           +DA  LLE A  LAT RVVVKRP  AP +  +    A+  K  R+DIY
Sbjct: 198 LDADGLLEPARQLATKRVVVKRPDYAPPLADVATPNAIVTKGHRFDIY 245