Pairwise Alignments

Query, 540 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 492 a.a., methyl-accepting chemotaxis protein from Pseudomonas sp. SVBP6

 Score =  157 bits (396), Expect = 1e-42
 Identities = 115/399 (28%), Positives = 191/399 (47%), Gaps = 14/399 (3%)

Query: 154 VWLAGRKQLNDLIVANKQLADQATTNIVNAVLAAKISMVLSLLIAVMAAAACGLLLMRSI 213
           V L G   L D  +A  Q+       I  AVLA   S++          A C L+LM ++
Sbjct: 96  VELEGMPLLGDNPLAGAQVISHGDQQI--AVLAPSPSLIQVFTDRFTNYAVCVLILMLAM 153

Query: 214 MAPMQLIVRIL--------DVM----RTGDLSTRLSLSRKDEFNAVETGFNDMVTELTAL 261
           +   QL++R L        DVM    +TGDLS R+ L+  DE   + + FN M T    +
Sbjct: 154 LCASQLLIRFLLSQLNTLKDVMLHVEKTGDLSARVPLACGDEVGQMASAFNAMQTTYHRV 213

Query: 262 VAQAQRSSVQVTTSVTEIAATSRQQQATATETAATTTEIGATSREIAATSRDLVRTMTEV 321
           V    R++ Q+ +    +AA+    +       + T +      E+ AT   + +     
Sbjct: 214 VNTVARTAAQLDSGAARLAASMNDVRHGMLGQQSETDQAATAINEMTATVYHIAQHAGAT 273

Query: 322 TSAADQASVLAGSGQQGLARMEDTMHQVMGAANLVNAKLAILNEKAGNINQVVVTIVKVA 381
              +  A  LAGSGQ+ ++R++ ++  +          +  L + +  IN VV  I  +A
Sbjct: 274 RDLSQSADTLAGSGQEVVSRVQTSIAGLSSGVQQTAEMIRQLADDSQKINGVVGVIHSIA 333

Query: 382 DQTNLLSLNAAIEAEKAGEYGRGFAVVATEVRRLADQTAVATYDIEQMVREIQSAVSAGV 441
           +QTNLL+LNAAIEA +AG+ GRGFAVVA EVR LA +   +T +I  MV  +Q+     V
Sbjct: 334 EQTNLLALNAAIEAARAGDLGRGFAVVADEVRNLAKRVQASTDEITTMVSALQAGTRDAV 393

Query: 442 MGMDKFSEEVRRGMFEVTQVGEQLSQIIHQVQALAPRVLMVNEGMQAQATGAEQINQALV 501
             M + S +    + +  + G  L++I   V  +      +    + Q+  AE++N+A+V
Sbjct: 394 DFMQESSFKADDCVQQAQEAGAALAEITSAVAQMRESNTQIAVAAEQQSQVAEEMNRAVV 453

Query: 502 QLADASSQTVESLRQASFAIDELSQVAVGLRSGVSRFKV 540
            + D + +TV+    ++    EL+ +A  L   + + K+
Sbjct: 454 SIRDVTEETVQQTVDSATTSSELATLAGELNKAIGQLKL 492