Pairwise Alignments

Query, 540 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 540 a.a., hypothetical protein from Pseudomonas sp. RS175

 Score =  775 bits (2001), Expect = 0.0
 Identities = 417/540 (77%), Positives = 464/540 (85%)

Query: 1   MKNWTLRQRILASFAVIIAIMLLMVVVSYSRLLSIESSEEDVRLDALPGVYYSTLVRSAW 60
           MKNWTLRQRILASFAVIIAIMLLMVVVSYSRLL I+ SEE VR DALPGVYYS+++R  W
Sbjct: 1   MKNWTLRQRILASFAVIIAIMLLMVVVSYSRLLKIQDSEEKVRADALPGVYYSSMIRGGW 60

Query: 61  GESYIRTLELIAEGQGRPLTKQERDQFQGFDENLQAQMDGYKKSIFDDTDRDSFALFEKR 120
            +SY++T +++     R +T ++R Q+QGF+++L+ ++  Y+K I D  D+ SF  FE  
Sbjct: 61  VDSYVKTQQIVGLSGNREITAEDRAQYQGFEQHLREEIQNYQKLIEDPADQVSFDEFEVN 120

Query: 121 REAYSRMLADVHAKYDRGDYAGARAEFYGEVNPVWLAGRKQLNDLIVANKQLADQATTNI 180
            + +++ LA     Y R DY GAR     ++   WL GR  LN +I  N++LA+QA   I
Sbjct: 121 HQTFNQALAKALDLYQRKDYEGARQVVNKDLTAAWLDGRGHLNQIIERNRELAEQAADTI 180

Query: 181 VNAVLAAKISMVLSLLIAVMAAAACGLLLMRSIMAPMQLIVRILDVMRTGDLSTRLSLSR 240
             AV+AAKI+M LSLL+A++ A  CGLLLMR+IMAPM  IV ILDVMR+GDLS RL+L+R
Sbjct: 181 GTAVMAAKIAMGLSLLVALVIALLCGLLLMRAIMAPMNRIVEILDVMRSGDLSGRLNLAR 240

Query: 241 KDEFNAVETGFNDMVTELTALVAQAQRSSVQVTTSVTEIAATSRQQQATATETAATTTEI 300
           KDEF AVETGFNDM+ ELTALV+QAQRSSVQVTTSVTEIAATSRQQQATATETAATTTEI
Sbjct: 241 KDEFGAVETGFNDMMAELTALVSQAQRSSVQVTTSVTEIAATSRQQQATATETAATTTEI 300

Query: 301 GATSREIAATSRDLVRTMTEVTSAADQASVLAGSGQQGLARMEDTMHQVMGAANLVNAKL 360
           GATSREIAATSRDLVRTMTEV++AADQASV AGSGQQGLARME+TMH VMGAA+LVNAKL
Sbjct: 301 GATSREIAATSRDLVRTMTEVSTAADQASVAAGSGQQGLARMEETMHSVMGAADLVNAKL 360

Query: 361 AILNEKAGNINQVVVTIVKVADQTNLLSLNAAIEAEKAGEYGRGFAVVATEVRRLADQTA 420
           AILNEKAGNINQVV TIVKVADQTNLLSLNAAIEAEKAGEYGRGFAVVATEVRRLADQTA
Sbjct: 361 AILNEKAGNINQVVTTIVKVADQTNLLSLNAAIEAEKAGEYGRGFAVVATEVRRLADQTA 420

Query: 421 VATYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGMFEVTQVGEQLSQIIHQVQALAPRVL 480
           VATYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGM EV QVGEQLSQIIHQVQALAPRVL
Sbjct: 421 VATYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGMAEVQQVGEQLSQIIHQVQALAPRVL 480

Query: 481 MVNEGMQAQATGAEQINQALVQLADASSQTVESLRQASFAIDELSQVAVGLRSGVSRFKV 540
           MVNEGMQAQATGAEQIN ALVQL DASSQTVESLRQAS AIDELSQVAVGLRSGVSRFKV
Sbjct: 481 MVNEGMQAQATGAEQINHALVQLGDASSQTVESLRQASSAIDELSQVAVGLRSGVSRFKV 540