Pairwise Alignments

Query, 540 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 658 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  162 bits (411), Expect = 3e-44
 Identities = 99/351 (28%), Positives = 176/351 (50%)

Query: 189 ISMVLSLLIAVMAAAACGLLLMRSIMAPMQLIVRILDVMRTGDLSTRLSLSRKDEFNAVE 248
           I +V+  ++A++ A    + L+RS +AP+  +VR  + +  GDLS RL++S  DE   + 
Sbjct: 308 IRLVIGSVLAMLLAVGATVWLLRSKLAPLSDLVRQAEALGAGDLSARLNVSSHDEIGQLA 367

Query: 249 TGFNDMVTELTALVAQAQRSSVQVTTSVTEIAATSRQQQATATETAATTTEIGATSREIA 308
             FN M   L+ +V+  ++++ +V +    ++  S        + +   T +     E +
Sbjct: 368 RSFNQMGEALSTMVSHIRKAAEEVNSRAQALSGLSGGAYEGMEQQSGEITSMAGAVEEFS 427

Query: 309 ATSRDLVRTMTEVTSAADQASVLAGSGQQGLARMEDTMHQVMGAANLVNAKLAILNEKAG 368
           ATS ++   M      A + +     G+  +     ++  +  + N     +  L +++ 
Sbjct: 428 ATSLNIADNMGATERLAQENAQQTRIGRNSMQEASSSLEHIATSLNSTATVINTLGQRSQ 487

Query: 369 NINQVVVTIVKVADQTNLLSLNAAIEAEKAGEYGRGFAVVATEVRRLADQTAVATYDIEQ 428
            I  +V  I  +A+QTNLL+LNAAIEA +AGE GRGFAVVA EVR LA +T  AT +I  
Sbjct: 488 EIGGIVGVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTRQATDEISG 547

Query: 429 MVREIQSAVSAGVMGMDKFSEEVRRGMFEVTQVGEQLSQIIHQVQALAPRVLMVNEGMQA 488
           M++ IQ      +  M+  +  ++ G+     V   L++I  Q ++   +   +    Q 
Sbjct: 548 MIQSIQHETGNAISTMEHGNALMQEGLSRNADVASALARIDEQSRSAGQQFAAITTATQE 607

Query: 489 QATGAEQINQALVQLADASSQTVESLRQASFAIDELSQVAVGLRSGVSRFK 539
           Q++ A  ++  L  +A A+S+  E +   +    EL  +A GLR  V RF+
Sbjct: 608 QSSTATLLSSNLQSIALANSEQREVVSNLAITAKELETLAAGLRHEVDRFR 658