Pairwise Alignments

Query, 540 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 542 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  194 bits (494), Expect = 5e-54
 Identities = 161/560 (28%), Positives = 274/560 (48%), Gaps = 42/560 (7%)

Query: 2   KNWTLRQRILASFAVIIAIMLLMVVVSYSRLLSIESSEEDVRLDALPGVYYSTLVRSAWG 61
           KN  +  +    F  I AI++ + V +Y +L  + ++ + +  +ALP       ++ +  
Sbjct: 4   KNLGISTKATLCFGSITAILIFLGVFAYVQLSHLRAAGQQLAENALPSTQTIDDIQISLL 63

Query: 62  ESYIRTLELIAEGQGRPLTKQERDQFQGFDENLQAQMDGYKKSIF-DDTDRDSFALFEKR 120
            + + ++ ++A             + Q   + L+ + D Y+K++   + DR+ F   ++ 
Sbjct: 64  NARLESIRMLANSTNVAGKSAAEAKVQHSVQILEERSDYYRKNLMAGEKDREQFEAADQA 123

Query: 121 REAYSRMLADVHAKYDRGDYAGA-----------RAEFYGEVNPVWLAGRKQLNDLIVAN 169
            + Y   LA + +K D  ++  A            + F  ++N +     +Q   L V  
Sbjct: 124 MKIYIAGLAQL-SKLDLSEHEQALIFANSTQADNASSFQEKLNVIRQFNAEQAKALGVE- 181

Query: 170 KQLADQATTNIVNAVLAAKISMVLSLLIAVMAAAACGLLLMRSIMAPMQLIVRILDVMRT 229
              AD      VN ++     +V+SLL+ ++ A A    L RSI+ P+   +R+ + + +
Sbjct: 182 ---ADVVYNESVNVLVTI---VVVSLLLTIVLAIA----LTRSIVKPVGDSLRLAEEIAS 231

Query: 230 GDLSTRLSLSRKDEFNAVETGFNDMVTELTALVAQAQRSSVQVT------TSVTEIAATS 283
           GDL+ RL ++  DE + +    N M   L   V +   +S+Q++      TS+TE A   
Sbjct: 232 GDLTRRLEITGTDEVSRLMVALNLMSKNLQDTVLEISEASIQLSSAAVEMTSITEAADRH 291

Query: 284 RQQQATATETAATTTEIGATSREIAATSRDLVRTMTEVTSAADQASVLAGSGQQGLARME 343
            QQQ +  E AAT         E+ +   ++ R  T  + AA ++S  A  G     R+ 
Sbjct: 292 LQQQNSEIEQAATAVT------EMTSAVEEVARNATSTSQAAQESSEAAKLGN---LRVS 342

Query: 344 DTMHQVMGAANLVNAKLAILNEKAG---NINQVVVTIVKVADQTNLLSLNAAIEAEKAGE 400
           +T+  V     LV +  + + E AG   +I+QVV  I  +A+QTNLL+LNAAIEA +AGE
Sbjct: 343 ETLSAVETLTELVESSASQVTELAGQAEDISQVVGVIRSIAEQTNLLALNAAIEAARAGE 402

Query: 401 YGRGFAVVATEVRRLADQTAVATYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGMFEVTQ 460
            GRGFAVVA EVR LA +T ++T +IE+M+  IQS  S  V  + + +EEV         
Sbjct: 403 QGRGFAVVADEVRALAHRTQISTLEIEKMITAIQSGSSTTVESIRRSTEEVYNTKRTAEG 462

Query: 461 VGEQLSQIIHQVQALAPRVLMVNEGMQAQATGAEQINQALVQLADASSQTVESLRQASFA 520
            G+ L QI   V  +  R L +    + QA  A  ++++L+ +   + Q+ E   Q   A
Sbjct: 463 AGQSLRQITDSVLQINERNLQIAVASEQQAHVARDVDRSLLSIRSLAIQSSEGANQTIKA 522

Query: 521 IDELSQVAVGLRSGVSRFKV 540
            +ELS++AV L   V +FKV
Sbjct: 523 SNELSRLAVNLNHLVQKFKV 542