Pairwise Alignments

Query, 695 a.a., Type III secretion protein HrcV from Pseudomonas syringae pv. syringae B728a

Subject, 697 a.a., type III secretion protein HrpI from Pseudomonas simiae WCS417

 Score =  802 bits (2071), Expect = 0.0
 Identities = 427/689 (61%), Positives = 534/689 (77%), Gaps = 11/689 (1%)

Query: 5   INFLNMVALSAMRRSELVGAFFVIAIVFMMITPLPTGLIDVLIAVNICISCLLIMLAMHL 64
           ++ +N   L   +R+E++GA  V+AIVF+ I PLPT L+D+LIA+NICISCLLI+LA++L
Sbjct: 4   LSAINSFLLKVAQRAEVLGAVVVMAIVFIFIVPLPTWLVDILIALNICISCLLIVLALYL 63

Query: 65  PRPLAFSTFPAVLLLTTMFRLALSVSTTRLILLNQDAGHIVEAFGQFVVGGNLAVGLVIF 124
           P PLAFS+FP++LLLTTMFRLALS++TTRLILL QDAGHIVEAFG FVVGGNLAVG+VIF
Sbjct: 64  PGPLAFSSFPSILLLTTMFRLALSIATTRLILLEQDAGHIVEAFGNFVVGGNLAVGMVIF 123

Query: 125 LILTVVNFLVITKGSERVAEVGARFTLDAMPGKQMSIDSDLRANLITVHEARKRRAELNK 184
           LILT+VNFLVITKGSERVAEV ARF+LDAMPGKQMSIDSDLRA LI   +AR +R +L++
Sbjct: 124 LILTLVNFLVITKGSERVAEVAARFSLDAMPGKQMSIDSDLRAGLIDGMQARDKREQLSR 183

Query: 185 ESQLFGAMDGAMKFVNGDAIASLIIVAINMIGGISIGVLQHNMAAGDALQLYTVLTIGDG 244
           ESQLFGAMDGAMKFV GDAIA LIIV +N++GG S G+ QH ++A +++ LY+VLTIGDG
Sbjct: 184 ESQLFGAMDGAMKFVKGDAIAGLIIVVVNLLGGFSTGMFQHGLSASESISLYSVLTIGDG 243

Query: 245 LIAQIPALLISVTSGMIITRVPNTEAGVEANIGREIAEQITSQPKAWIIASVAMLGFAAL 304
           LIAQIPALLIS+T+GMIITRV        +N+G EIA Q+TS+PK+W+IASV ML FA +
Sbjct: 244 LIAQIPALLISLTAGMIITRVAPDGRRGASNMGAEIARQMTSEPKSWMIASVGMLAFAVV 303

Query: 305 PGMPTGVFITIAIICGA-GGLLQLQRAKPKADEQRTA-TVAPEMNGKEDLRTFSPSRQFV 362
           PGMPTGVFI IA++ G+ G  L  QR + +     TA  V PE NG EDLR F PSR ++
Sbjct: 304 PGMPTGVFILIALVTGSLGYYLMRQRQRQEQPAAETAEAVRPEENGSEDLRGFDPSRPYL 363

Query: 363 LQFHPG-QDSAQIEALVSEIRKRRNRLVVQYGLTLPSFIIEHVDDIAPDEFRFTVYDVPM 421
           LQF P  + + ++  LV  IR+ RN LV   GLTLP F +E  D +A DE RF V++VPM
Sbjct: 364 LQFSPVIRGTPEVADLVHSIRQARNALVANIGLTLPPFEVELDDSLADDEMRFCVHEVPM 423

Query: 422 LKATFTQSHVAVEARQLEGENLPA-AIPGNTDRQEDQWVWL----PAEQSGELNPVSSTT 476
           +KA+   SHVAVE + L  E  PA AI G  +R E  W+WL    P     +L   ++ +
Sbjct: 424 VKASVV-SHVAVERKALSVE--PAHAIAGLVERDEQDWLWLAPDDPLLDDPQLERFTAAS 480

Query: 477 LIIERMERALQSCAPQFIGLQETKAILGWLESEQPELAQEMQRVLTLTRFSAVLQRLASE 536
           LI+ERM++A+    PQF+G+QE+K+IL WLE  QPEL QE+QR++ L+RFSAVLQRLASE
Sbjct: 481 LIVERMKQAMMLSGPQFLGIQESKSILSWLEHNQPELVQELQRIMPLSRFSAVLQRLASE 540

Query: 537 CVPLRAIRVIAETLIEHCQHERDTNVLTDYVRIALKSQIYHQYCGAEGLQVWLLTPESEG 596
            VPLRA+R+I E+LIE+ QHER+ + L DY RIALK+QIYHQY  A+GL  WLL+P++E 
Sbjct: 541 GVPLRAVRLIVESLIEYGQHEREPDALADYARIALKAQIYHQYSEADGLHAWLLSPQTEN 600

Query: 597 LLRDGLRQTQTETFFALSNEISQMLVQQLHIAFPVRAPEQAVLLVAQDLRSPLRTLLREE 656
           +LR+ LRQTQT  FFAL +E S +LV  L+ AFPVR   ++V+LVAQDLRSPLRTLL EE
Sbjct: 601 ILREALRQTQTGVFFALDDEHSAVLVSLLNQAFPVRPKLKSVMLVAQDLRSPLRTLLLEE 660

Query: 657 FYHVPVLSFAEISNAAKVKVMGRFDLEDD 685
           F HVPVLSFAE+ +A+KVKV+GRFDL  D
Sbjct: 661 FNHVPVLSFAELGSASKVKVLGRFDLGQD 689