Pairwise Alignments

Query, 695 a.a., Type III secretion protein HrcV from Pseudomonas syringae pv. syringae B728a

Subject, 690 a.a., EscV/YscV/HrcV family type III secretion system export apparatus protein from Ralstonia solanacearum PSI07

 Score =  437 bits (1123), Expect = e-126
 Identities = 265/685 (38%), Positives = 393/685 (57%), Gaps = 37/685 (5%)

Query: 24  AFFVIAIVFMMITPLPTGLIDVLIAVNICISCLLIMLAMHLPRPLAFSTFPAVLLLTTMF 83
           A  V+A+V +M+ PLPT LID L+ +NI +S +L+M+ M++P   + S FP++LL TT+ 
Sbjct: 17  ASLVVAVVALMVLPLPTMLIDGLLGLNITLSVVLLMVTMYIPSATSLSAFPSLLLFTTLL 76

Query: 84  RLALSVSTTRLILLNQDAGHIVEAFGQFVVGGNLAVGLVIFLILTVVNFLVITKGSERVA 143
           RL+L++++T+ ILL+ DAGHI+E+FG+ VVGGNL VGLV+FLI+T V F+VI KGSERVA
Sbjct: 77  RLSLNIASTKSILLHADAGHIIESFGKLVVGGNLVVGLVVFLIITTVQFIVIAKGSERVA 136

Query: 144 EVGARFTLDAMPGKQMSIDSDLRANLITVHEARKRRAELNKESQLFGAMDGAMKFVNGDA 203
           EVGARFTLDAMPGKQMSID+DLRA  ++  EARKRRA L  ESQL G MDGAMKFV GDA
Sbjct: 137 EVGARFTLDAMPGKQMSIDADLRAGHLSPEEARKRRALLAMESQLHGGMDGAMKFVKGDA 196

Query: 204 IASLIIVAINMIGGISIGVLQHNMAAGDALQLYTVLTIGDGLIAQIPALLISVTSGMIIT 263
           IA L+I  +N++ GI IG+  HNM AG+A   + VL+IGD +++QIP+LLISV +G++IT
Sbjct: 197 IAGLVITLVNILAGIVIGITYHNMTAGEAANRFAVLSIGDAMVSQIPSLLISVAAGVMIT 256

Query: 264 RVPNTE-AGVEANIGREIAEQITSQPKAWIIASVAMLGFAALPGMPTGVFITIAIICGAG 322
           RV + E A   +++G EI  Q+++  +A   AS  ++GFA +PG P+ +F T+A +  + 
Sbjct: 257 RVSDEENANRPSSLGMEIVRQLSTSARAMFTASALLVGFALVPGFPSFLFFTLAALIFSF 316

Query: 323 GLLQLQRAK----------PKADEQRTATVAPEMNGKEDLRTFSPSRQFVLQFHPGQDSA 372
           G     RAK          P    + +   AP +  +    T     +   Q   G D  
Sbjct: 317 GYTLRNRAKQGDGDDGDTLPALLREGSKGKAPSIAEQAPSFTVPVGVRLGAQLAKGLD-- 374

Query: 373 QIEALVSEIRKRRNRLVVQYGLTLPSFIIEHVDDIAPDEFRFTVYDVPMLKATFTQSHV- 431
            + AL +  ++ R+ L    GL  P   I   D + PD +   V+D+P +       H+ 
Sbjct: 375 -VPALDTAFQQGRHALAEALGLPFPGIAIWKADALQPDSYEVRVHDIPGMPVAVPDGHLL 433

Query: 432 ------AVEARQLEGENLPAAIPGNTDRQEDQWVWLPAEQSGELNPVSS----TTLIIER 481
                 A+ A+ LE   LP       +     W+  PA  + +    +S      +I + 
Sbjct: 434 IPDLPEALRAQALEAAELP-------NHPAPHWI-APAHVAHDAELTASGLRVERVIADH 485

Query: 482 MERALQSCAPQFIGLQETKAILGWLESEQPELAQEMQRVLTLTRFSAVLQRLASECVPLR 541
           +   L+  A  F+GLQET+ +L  + ++ P L  E Q+ +   R + VL+RL  E VP+R
Sbjct: 486 VVDVLRRSAHLFVGLQETQWMLERVTTDYPGLVAEAQKAVPAQRIADVLRRLLEEQVPIR 545

Query: 542 AIRVIAETLIEHCQHERDTNVLTDYVRIALKSQIYHQYC-GAEGLQVWLLTPESEGLLRD 600
            +R I E+L+     E+DT +L +YVR  L  QI HQ   G   +   LL    E  +R 
Sbjct: 546 NMRAILESLVVWGPKEKDTLMLVEYVRGDLGRQIAHQATGGTRQMPAILLDLSVEQTVRQ 605

Query: 601 GLRQTQTETFFALSNEISQMLVQQLH---IAFPVRAPEQAVLLVAQDLRSPLRTLLREEF 657
            ++ T    F  L  +  + +V +LH      PV AP Q  ++ + D+R  +R ++    
Sbjct: 606 AIKPTPAGNFLTLDPQQVEAIVMRLHGIMQGSPVEAPSQLAIVTSMDIRRYVRRMIEPHL 665

Query: 658 YHVPVLSFAEISNAAKVKVMGRFDL 682
             + V SF E+     ++ +G+  L
Sbjct: 666 QALNVYSFQELGGYVDLRPVGKLVL 690