Pairwise Alignments

Query, 449 a.a., type III secretion cytoplasmic ATPase HrcN from Pseudomonas syringae pv. syringae B728a

Subject, 444 a.a., Flagellum-specific ATP synthase from Alteromonas macleodii MIT1002

 Score =  329 bits (843), Expect = 1e-94
 Identities = 193/431 (44%), Positives = 259/431 (60%), Gaps = 17/431 (3%)

Query: 24  VIGRVSAVRGILLE-----CKIPSAKVGDLCEVSKADGSLLLAEIVGFTQECTLLSALGP 78
           V+     VRGI L      C++P   VG  C V   +G +  AE+VGF  + T L     
Sbjct: 21  VVAAGKLVRGIGLTLEAVGCQLP---VGSQCLVQTIEGEIE-AEVVGFGDDITYLMPTEA 76

Query: 79  PDGIQVGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGDCLGAFAGPEDRRTTLPVIAD 138
             GI  G+ + PL     + V   LLG V+DG G+PL G  LG         TT P    
Sbjct: 77  VRGIVPGSRVMPLNRQSGLPVGMGLLGRVVDGNGQPLDG--LGEINAEARAPTTRP---- 130

Query: 139 ALPPTQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIV 198
            + P  R  I   +  G+RAI++   +G GQR+GLFAG+G GK+ L+  + R  + DV+V
Sbjct: 131 PMNPLIRRPINTPMDVGVRAINALNTVGVGQRMGLFAGSGVGKSVLLGMMTRGCEADVVV 190

Query: 199 FGLIGERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRARGQ 258
            GL+GERGRE++EF+   L E  R+R+V+V A +D S + R +   TA  IAE FR +G 
Sbjct: 191 VGLVGERGREVKEFIHEILTEEERQRAVVVAAPADTSPLMRLKGCETAVTIAEYFRDKGM 250

Query: 259 KVLLLLDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPRLVERA--GMSENGSITAL 316
           KVLLL+DSLTR+A AQREI +A GEP    G PPSV+  LP LVERA  G    GSITA 
Sbjct: 251 KVLLLIDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVERAGNGSERQGSITAF 310

Query: 317 YTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQ 376
           YTVL E D + DP+AD  R++LDGH+VLSR LA+ GHYPAID+ ASISR++  V   EHQ
Sbjct: 311 YTVLTEGDDLQDPIADAARAILDGHVVLSRTLADSGHYPAIDIEASISRVMPMVVSEEHQ 370

Query: 377 RANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQDLREPVPLQET 436
               R+RQ+ + YKQ + L+ +G Y  G+DP  D A++   AINA L+Q +++ +P  E+
Sbjct: 371 LMARRIRQVYSNYKQNQDLISIGAYAKGSDPRIDLAIRAEPAINALLQQGVKQVIPYDES 430

Query: 437 LDRLLQLTSQL 447
           L+ +  L   L
Sbjct: 431 LEGMAALAKGL 441