Pairwise Alignments

Query, 314 a.a., type III transcriptional regulator HrpR from Pseudomonas syringae pv. syringae B728a

Subject, 458 a.a., sigma-54-dependent Fis family transcriptional regulator from Pseudomonas fluorescens SBW25

 Score =  227 bits (579), Expect = 4e-64
 Identities = 126/278 (45%), Positives = 178/278 (64%), Gaps = 7/278 (2%)

Query: 34  DLLLCGETGTGKDTLASRIHELSSR-TGPFVGMNCAAIPESLAESQLFGVVNGAFTGVCR 92
           D+L+ GETG GK+ +A  +H+LSSR +GPFV +N  A+ ES+ ES+LFG   GAFTG  +
Sbjct: 171 DVLILGETGAGKEVVARALHDLSSRRSGPFVAINAGALAESVVESELFGHEPGAFTGAQK 230

Query: 93  AREGYIEASSGGTLYLDEIDSMPLSLQAKLLRVLESRGVERLGSTDFIPLDLRVIASAQR 152
            R G  E ++GGTL+LDEI+SM L +Q KLLR+L+ R VERLG    IPLD+R+IA+ + 
Sbjct: 231 RRIGKFEFANGGTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKE 290

Query: 153 PLDELVEQGLFRRDLFFRLNVLTLQLPALRKRREQILPLFDQFTQDVAAESGRSVPTLDN 212
            L +  +QG FR DL++RLNV  L++P LR+R E  L LF  F  + ++  G  +  L  
Sbjct: 291 DLRQSADQGRFRADLYYRLNVAPLRIPPLRERGEDALMLFQHFADEASSRHGLPLHELQP 350

Query: 213 RRVQILLSHDWPGNVRELKSAAKRFVLGLPL-LGAEPVEARDPVT-----GLRMQMRVIE 266
            +  +LL H WPGNVREL++AA+RF LGL L L + P      V      GL  Q+   E
Sbjct: 351 GQRALLLRHSWPGNVRELQNAAERFALGLELALDSSPDNPAAGVLTSTPGGLSEQVEQFE 410

Query: 267 KMLIQDALKRHRHNFDAVLEELELPRRTLYHRMKELGV 304
           K LI   L R   +  ++ E L +PR+TL+ ++++ G+
Sbjct: 411 KSLIAAELTRPHGSMRSLAEALGVPRKTLHDKLRKHGL 448