Pairwise Alignments

Query, 341 a.a., TRAP dicarboxylate transporter- DctP subunit from Pseudomonas syringae pv. syringae B728a

Subject, 323 a.a., D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) from Pseudomonas putida KT2440

 Score =  499 bits (1284), Expect = e-146
 Identities = 250/327 (76%), Positives = 283/327 (86%), Gaps = 4/327 (1%)

Query: 1   MDFKRKLLIAALPLAFCVSGMAQADVKIKFAEVHPAGYAPVVAEQNMGKKLEEQSKGEIS 60
           M FKRKLL+A LP AF V+  A A + IKFAE+HPAGY  VVAEQNMGKKLE+ S GEI+
Sbjct: 1   MTFKRKLLLAVLPFAFSVAMPASA-LDIKFAEIHPAGYPTVVAEQNMGKKLEDASNGEIT 59

Query: 61  FKMYAGGVLGSEKEVVEQVQSGAVQMTRVSLGIVGPVVPDVNVFNLPFVFHDQAHMRTII 120
           FKM+AGGVLGSEKEV+EQ Q GAVQMTRVSLGIVGPVVPDVNVFN+PFVF D  HMR II
Sbjct: 60  FKMFAGGVLGSEKEVIEQAQIGAVQMTRVSLGIVGPVVPDVNVFNMPFVFRDHDHMRKII 119

Query: 121 DGQIGQEILDKITNSEFNMVALAWMDGGTRNLYTKKPVRQISDLKGMKIRVQGNPVFIET 180
           DG+IGQEILDKITNS+FN+VALAWMDGG+R++YTKKPVR + DLKGMKIRVQGNP+FI+ 
Sbjct: 120 DGEIGQEILDKITNSDFNLVALAWMDGGSRSIYTKKPVRSLEDLKGMKIRVQGNPLFIDM 179

Query: 181 INDMGGNGIAMATGEIFSALQTGVIDGAENNPPTYFQHNHYQNAKFFTMTEHLILPEPIV 240
           +N MGGNGIAM TGEIFSALQTGVIDGAENNPPT  +HNH+Q+AK++T+T HLILPEP+V
Sbjct: 180 MNAMGGNGIAMDTGEIFSALQTGVIDGAENNPPTLLEHNHFQSAKYYTLTGHLILPEPVV 239

Query: 241 MSKTTWEKLNPEQQALVKKLAREAQMEERVLWDKSSADAETKLKAAGVEFITLTPEQKKA 300
           MSKTTW KL+PEQQALVKK+AREAQMEER LWD  SA +E KLKAAGVEFIT+    KK 
Sbjct: 240 MSKTTWNKLSPEQQALVKKVAREAQMEERALWDAKSAASEEKLKAAGVEFITV---DKKP 296

Query: 301 FYDATQPVRDKYGAKYKGLIDRIGAVQ 327
           FYDAT  VR+KYGA+Y  L+ RI AVQ
Sbjct: 297 FYDATASVREKYGAQYADLMKRIDAVQ 323