Pairwise Alignments

Query, 341 a.a., TRAP dicarboxylate transporter- DctP subunit from Pseudomonas syringae pv. syringae B728a

Subject, 333 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  154 bits (390), Expect = 2e-42
 Identities = 87/308 (28%), Positives = 165/308 (53%), Gaps = 4/308 (1%)

Query: 6   KLLIAALPLAFCVSGMAQADVKIKFAEVHPAGYAPVVAEQNMGKKLEEQSKGEISFKMYA 65
           K L+AAL +    +  AQ D  IKFA  +P G+  V+  +   + +  +S G+I   ++ 
Sbjct: 7   KTLVAALAVTAFGAVHAQ-DKTIKFATQNPKGHPIVMGMEKFAELVAAKSGGKIKVNLFP 65

Query: 66  GGVLGSEKEVVEQVQSGAVQMTRVSLGIVGPVVPDVNVFNLPFVFHDQAHMRTIIDGQIG 125
           GG LGS++  V  +Q G ++M  ++ GI    V +  +++ PF+F +      ++DG  G
Sbjct: 66  GGTLGSDQANVSAIQGGTLEMASMNSGIFASQVKEFAIYDFPFMFANTKEADAVVDGPFG 125

Query: 126 QEILDKITNSEFNMVALAWMDGGTRNLY-TKKPVRQISDLKGMKIRVQGNPVFIETINDM 184
           +++ DK+   E  ++ LA+ + G RN+  +K+P+ ++ DL+G+K+RV  NP+ ++ +  +
Sbjct: 126 KKLHDKL--QEKGLIGLAYYELGFRNITNSKRPITKLEDLEGLKLRVIPNPINVDWVKAL 183

Query: 185 GGNGIAMATGEIFSALQTGVIDGAENNPPTYFQHNHYQNAKFFTMTEHLILPEPIVMSKT 244
           G N   +   E+++AL+   IDG EN       +  Y+  K+  ++ H   P+ +++SK 
Sbjct: 184 GANPTPLPFPEVYAALEQKAIDGQENPVTVINANKFYEVQKYVVLSNHQYNPQSVIISKK 243

Query: 245 TWEKLNPEQQALVKKLAREAQMEERVLWDKSSADAETKLKAAGVEFITLTPEQKKAFYDA 304
            W+ L+  Q+ +V   A+E+   +R       A A   +K  G++   L+P +     D 
Sbjct: 244 FWDTLDAAQKKIVADAAQESAKYQREQARGQVAAALDNMKKGGMQVTELSPAETDKLRDK 303

Query: 305 TQPVRDKY 312
            +PV  K+
Sbjct: 304 LRPVIAKF 311