Pairwise Alignments

Query, 341 a.a., TRAP dicarboxylate transporter- DctP subunit from Pseudomonas syringae pv. syringae B728a

Subject, 334 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  140 bits (353), Expect = 5e-38
 Identities = 79/266 (29%), Positives = 148/266 (55%), Gaps = 6/266 (2%)

Query: 53  EQSKGEISFKMYAGGVLGSEKEVVEQVQSGAVQMTRVSLGIVGPVVPDVNVFNLPFVFHD 112
           ++S G++    Y  G LG++    +QV++G++ M   S   +   +P + VF+LPF+F +
Sbjct: 53  DKSGGKLKLVTYYDGALGNDTTASQQVRTGSLDMVLTSTAPLVGAIPQLAVFDLPFLFSN 112

Query: 113 QAHMRTIIDGQIGQEILDKITNSEFNMVALAWMDGGTRNLY-TKKPVRQISDLKGMKIRV 171
           +     ++DG +G+    K   +   +V LA+ + G RN+  +K+ V +  DL+G+K+RV
Sbjct: 113 EREADQLLDGPVGKSFAPKYEAA--GLVNLAYWENGFRNVTNSKRAVGKWEDLQGVKMRV 170

Query: 172 QGNPVFIETINDMGGNGIAMATGEIFSALQTGVIDGAENNPPTYFQHNHYQNAKFFTMTE 231
             N VF++T + +G N   +A  E++SAL+T  +DG EN          Y+  K+ ++T 
Sbjct: 171 MQNKVFLDTFSALGSNPTPLAFSEVYSALETRTVDGQENPIALIENMKFYEVQKYLSLTR 230

Query: 232 HLILPEPIVMSKTTWEKLNPEQQALVKKLAREAQMEERVLWDKSSADAETKLKAAGVEFI 291
           H   P  +++SK  ++ L+P++QA++++ A   Q E R +   + AD   KLK  G++  
Sbjct: 231 HAYSPLAVLISKKKYDTLSPQEQAVMQECAVTGQEESRRVGRAADADVIAKLKKNGMQVN 290

Query: 292 TLTPEQKKAFYDATQPVRDKYGAKYK 317
            ++P + +   D    V+D Y ++ K
Sbjct: 291 EVSPAELQRMRD---KVKDVYASQAK 313