Pairwise Alignments

Query, 341 a.a., TRAP dicarboxylate transporter- DctP subunit from Pseudomonas syringae pv. syringae B728a

Subject, 344 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  142 bits (359), Expect = 9e-39
 Identities = 85/311 (27%), Positives = 166/311 (53%), Gaps = 6/311 (1%)

Query: 6   KLLIAALPLAFCVSGMAQADV---KIKFAEVHPAGYAPVVAEQNMGKKLEEQSKGEISFK 62
           KL    +  A  ++  A A++   KIKFA V  A    +       + ++++S G+I  K
Sbjct: 15  KLSTCVVFSAAALATAAHAEIREHKIKFAYVTAADTGKLNGVDKFVELVKQKSAGKIDIK 74

Query: 63  MYAGGVLGSEKEVVEQVQSGAVQMTRVSLGIVGPVVPDVNVFNLPFVFHDQAHMRTIIDG 122
           ++ GG LG + +++  +Q G ++M  +    +  VVPD ++ +LP++  ++     +IDG
Sbjct: 75  VFPGGSLGGDVQMISAMQGGTLEMAVMGPNALVGVVPDFSLLDLPYLVDNEKEASGLIDG 134

Query: 123 QIGQEILDKITNSEFNMVALAWMDGGTRNLY-TKKPVRQISDLKGMKIRVQGNPVFIETI 181
            +G+ + DK+      +V +     G R+++ +K+PV ++ D+ G+K+RV  +PV+++ +
Sbjct: 135 AVGKALFDKLAAK--GVVGMPISAFGFRHMHNSKRPVNRLEDISGLKLRVIQSPVYVDFV 192

Query: 182 NDMGGNGIAMATGEIFSALQTGVIDGAENNPPTYFQHNHYQNAKFFTMTEHLILPEPIVM 241
             +  N +AM+  E+++A++   IDG  N          Y+  K+ ++T H+     +++
Sbjct: 193 KAIDANPVAMSFTEVYNAMEQKAIDGMTNTALIASSMKAYEVQKYMSLTRHMYNHIVLLI 252

Query: 242 SKTTWEKLNPEQQALVKKLAREAQMEERVLWDKSSADAETKLKAAGVEFITLTPEQKKAF 301
           S   W+K N E++AL+++ A EA+  +R L  + +A A   LKA  +    +   +    
Sbjct: 253 SGKAWDKFNDEEKALIRQAADEAKQHQRKLLVEVTAKAFADLKANKMVINDVPAAEIARL 312

Query: 302 YDATQPVRDKY 312
             A QPV DKY
Sbjct: 313 RVAAQPVVDKY 323