Pairwise Alignments

Query, 341 a.a., TRAP dicarboxylate transporter- DctP subunit from Pseudomonas syringae pv. syringae B728a

Subject, 327 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  187 bits (474), Expect = 4e-52
 Identities = 109/310 (35%), Positives = 166/310 (53%), Gaps = 10/310 (3%)

Query: 7   LLIAALPLAFCVSGMAQADVKIKFAEVHPAGYAPVVAEQNMGKKLEEQSKGEISFKMYAG 66
           LL   L LAF     A A   +K +      +A   A   +  K +  S GE++ ++Y  
Sbjct: 13  LLAGCLLLAF----PALAKTTLKLSHNQDKSHAVHKAMSYLADKAKAYSDGELNIRIYPN 68

Query: 67  GVLGSEKEVVEQVQSGAVQMTRVSLGIVGPVVPDVNVFNLPFVFHDQAHMRTIIDGQIGQ 126
             LG+E+E +E + SGA+QM +V+   +    P+ +VF+LPF+F D+ H   ++   +G+
Sbjct: 69  ATLGNERESLELMNSGALQMVKVNAASLESFAPEYSVFSLPFLFRDRDHYYNVLKSDLGK 128

Query: 127 EILDKITNSEFNMVALAWMDGGTRNLYTKKPVRQISDLKGMKIRVQGNPVFIETINDMGG 186
            IL    +  F  V L W DGG R+ Y  KP+ Q  DL GMKIRVQ +P  I  +  +GG
Sbjct: 129 RILASSESKGF--VGLTWYDGGARSFYAGKPITQPDDLAGMKIRVQQSPSAIAMVKALGG 186

Query: 187 NGIAMATGEIFSALQTGVIDGAENNPPTYFQHNHYQNAKFFTMTEHLILPEPIVMSKTTW 246
               MA GE+++ALQ GV+DG ENNP  Y    H + AKF++  EH ++P+ +V+S    
Sbjct: 187 VPTPMAQGELYTALQQGVVDGGENNPVVYADMRHAEVAKFYSRDEHTMVPDVLVISTKVL 246

Query: 247 EKL-NPEQQALVKKLAREAQMEERVLWDKSSADAETKLKAAGVEFITLTPEQKKAFYDAT 305
            KL + E++AL K      Q  + V+W  +  +A   +KA      T+    K AF    
Sbjct: 247 NKLSDKERKALYKAADESMQQMKDVIWPAAEKEAYESMKAMNA---TVVDIDKSAFKQRV 303

Query: 306 QPVRDKYGAK 315
           +P+ D++ AK
Sbjct: 304 KPLFDEFRAK 313