Pairwise Alignments

Query, 551 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 529 a.a., MCP four helix bundle domain-containing protein from Dickeya dadantii 3937

 Score =  273 bits (699), Expect = 9e-78
 Identities = 178/522 (34%), Positives = 290/522 (55%), Gaps = 21/522 (4%)

Query: 1   MKWFYDLKISTKLITSFLVVLALTAAMGVFAIIQLGQVNQAAQDIKENWMPSMRAAAGMR 60
           MK F  L + +KL+  F V++ +   +G  +I QL   N      +++ +P +R    MR
Sbjct: 1   MKKFSQLTVFSKLLFGFSVLIVMMLLIGAVSIYQLSANNGRIDAYRDSRLPGVRYTLEMR 60

Query: 61  FFAANYRLKENRHIAADTAQEKAQMELEAADSRKQFETRLAIYDKLISSD--DDRQLFNS 118
              +  RL++ ++I++ T  E+     E   ++  F    A Y KL+ SD  D + LF+ 
Sbjct: 61  GVLSELRLQQIQYISSKTPDEREGHRKELLQNQDVFLNAQANYAKLVKSDAQDKQALFSQ 120

Query: 119 VSASWAAYLKVSNDLFDQSRQNLEAQARALLKGESKTHFDEVTTQLQKMVELNEAGATIA 178
           V+ ++  ++ V+  + D         A  +    S  +  ++   L K+VE+  A    A
Sbjct: 121 VTDNFKNFVDVNAKVIDAVNSEKLDDASKISGAVSAKYRTQLMKDLAKLVEMEIASGDQA 180

Query: 179 GNKGTSLYETSRISIIVVLIAALLIGLGLALFIARIISRPL----KEAATAAEQLAEGNL 234
             +    Y T+   +  +L+ A++    +A  IAR +SR L      AA+   Q+A GNL
Sbjct: 181 AVESAEGYRTALYILSGLLLLAVIATGIIATLIARNLSRQLGGEPAYAASIMNQIAAGNL 240

Query: 235 NAHIGHGSRDETGMVLNAMRNMVGKLSHIIGEVRNAADNLASASEEVSATAQSMSQATSE 294
           N  I   + D   M L  M+NM  KL+ II  + N +++++ A+ E++     +SQ T E
Sbjct: 241 NTSIMLRAGDTQSM-LATMKNMNEKLADIIHNIVNGSESISLAASEIAQGNSDLSQRTEE 299

Query: 295 QAASVEETSASVEQMSASINQNTENAKVTDGMASKAAKEATDGGESVQQTVVAM------ 348
           QAAS+ +TS++++Q++ ++ +N +NA     +A + ++ A  GG  V   +  M      
Sbjct: 300 QAASLVQTSSNMQQITETVKRNADNAHQASELARQTSQTAVHGGNVVDDMLKRMHEISDS 359

Query: 349 -KKIAQRISIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQVAAQEI 407
            +KI   IS+I+ IA+QTN+LALNAA+EAARAGE GKGFAVVA EVR LA++S  AA+EI
Sbjct: 360 SQKIVDIISVIEGIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRNLAQKSANAAKEI 419

Query: 408 GELSSSSVDM-------AEKAGKLLDEMVPSINKTSDLVQEISAASEEQAAGVAQINTAM 460
             L   +V+        A+ A + +DE+V S+ K +D+V EIS AS EQ  G+ +I  A+
Sbjct: 420 KTLIEGTVEKITDGSRHADTASQAMDEIVSSVTKVTDIVAEISMASNEQHQGIKEIGVAI 479

Query: 461 TQLNQVTQQNASSSEELAATAEEMSSQAEQLQQAMSFFTLDA 502
            Q+++VTQQNA+  E+ A  A+ M+ Q EQL+ ++ FF L+A
Sbjct: 480 DQMDRVTQQNAALVEQAATAAQSMTEQGEQLRDSVRFFRLEA 521