Pairwise Alignments

Query, 295 a.a., farnesyl-diphosphate synthase from Pseudomonas syringae pv. syringae B728a

Subject, 301 a.a., Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  253 bits (646), Expect = 4e-72
 Identities = 151/272 (55%), Positives = 179/272 (65%), Gaps = 5/272 (1%)

Query: 2   IASYQAQSQTRVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGV 61
           +A  QAQ Q  V  AL+    A  P    L  AMRY+V++GGKR+RPLL  A CEA+GG 
Sbjct: 12  VAWRQAQ-QDAVERALERWVSADAPA--GLGDAMRYAVLDGGKRLRPLLVLATCEAVGGH 68

Query: 62  AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
           A  A  AACAVELIHAYSLVHDD+P MD+D LRRG+PT H  F EA A+LAGD LQ+LAF
Sbjct: 69  AAAAMRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQFGEAQALLAGDALQALAF 128

Query: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
             LL P   S       ++   LA AAG  GM GGQA+DL SVG+ LDQ ALE MHR KT
Sbjct: 129 -ELLVPGDGSLGDAMSARLCRLLALAAGADGMAGGQAVDLASVGVALDQPALEAMHRRKT 187

Query: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
           GAL++ASV +GA A+G      L  L  Y   +GLAFQV DDILDV +D+ATLGK  G D
Sbjct: 188 GALLQASVTMGA-ATGSPSPQSLALLAEYGACVGLAFQVVDDILDVTADSATLGKTAGKD 246

Query: 242 IARDKPTYPALLGLEAAKHYALELRDQALQAL 273
            A DKPT+ +L+GL  A+ YA  +  QA   L
Sbjct: 247 AAADKPTFVSLMGLAQAQAYADRVLAQAHDTL 278