Pairwise Alignments

Query, 349 a.a., OmpA/MotB from Pseudomonas syringae pv. syringae B728a

Subject, 308 a.a., flagellar motor protein MotB from Escherichia coli ECRC100

 Score =  218 bits (554), Expect = 2e-61
 Identities = 120/310 (38%), Positives = 183/310 (59%), Gaps = 22/310 (7%)

Query: 7   IIIKRVKRFGGGHHGGAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYFKDPVGF 66
           I++KR K    G   G+WKIA+ADF TAMMAFFLV+WL+S ++P++L+ +A YF+ P+  
Sbjct: 9   IVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRTPLAT 68

Query: 67  SDSGSPYVIDL-----GGSPEMSPNQTLNPEVQTTPSPDTVPLEAENAETKAEAVEQERL 121
           + +G   + +      GG  + + +Q    EV   P          N E   + +EQ RL
Sbjct: 69  AVTGGDRISNSESPIPGGGDDYTQSQG---EVNKQP----------NIEELKKRMEQSRL 115

Query: 122 EMLLQELQTKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDI 181
             L  +L   +E +P+L+  +  +  ++ Q+GLRIQI+D++NRPMF +GSA ++PY  DI
Sbjct: 116 RKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDI 175

Query: 182 LLALADTIKSVPNKVSISGHTDATPFV-GSGGFGNWELSANRANAARRALVAGTYPDSQV 240
           L A+A  +  +PN++S+SGHTD  P+  G  G+ NWELSA+RANA+RR L+ G     +V
Sbjct: 176 LRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKV 235

Query: 241 ARVVGYASSALYDRQNPTNPINRRIDIVVLTKKAQHRI---EGDQNSGGAPATPAAPTAP 297
            RVVG A++     + P + +NRRI ++VL K+A+  I     +  +    A      AP
Sbjct: 236 LRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQAEQAILHENAESQNEPVSALEKPEVAP 295

Query: 298 APAVPAAPGA 307
             +VP  P A
Sbjct: 296 QVSVPTMPSA 305